Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq109 91.5 2e-13 >seq109 Length=251363 Score = 91.5 bits (100), Expect = 2e-13 Identities = 284/437 (65%), Gaps = 11/437 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| | |||||||| ||| ||||||| ||||| || ||||| ||| | | | Sbjct 60755 CCACAACACATGCTTATGCGGGTTGCGGTCGGTATTCATGGCGAGGATATCGATGCAGCT 60696 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGG----TATGTTCATCCACGCAACACCAACCCT 111727 | || || ||| | ||| ||| ||| |||| || ||| ||||||| | Sbjct 60695 ATTGAAACGTACAATCTAATGA---GTGAACGATAT-TTCACTCATGCATCACCAACAAT 60640 Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 || |||||||| |||| | | || || | || ||||| || | | | | || Sbjct 60639 GTTTAACGCTGGAACACTATGGCCGCAGCTTTCATCATGTTTTCTGTTGACGATGAGTGA 60580 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 |||||| || || ||||| | || | | ||||||| | ||| || ||| | || Sbjct 60579 GGATTCGATTGCCGGTATTTATGATACATTGAAGCAATGTGCTCTAATATCGAAGAGTGC 60520 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 ||| || ||||| || || | ||| | | | |||| ||| ||| | || || Sbjct 60519 TGGAGGAATCGGTTTGAACGTACATAAAATTCGGGCCACTGGTTCTTTGATTGGCGGCAC 60460 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| || ||| |||| | |||||||| | ||||||| ||| || || || || Sbjct 60459 AAACGGCACATCCAATGGGTTGGTTCCAATGTTACGCGTATACAACAATACTGCTCGATA 60400 Query 111968 TGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | |||| || | || ||| || | ||| ||||||| ||||||||||| Sbjct 60399 CGTTGATCAAGGCGGCAATAAACGACCAGGAGCTTTTGCAATCTATCTCGAGCCATGGCA 60340 Query 112025 CGCGGATATCATGGAGT 112041 || ||||| | |||| Sbjct 60339 TGCAGATATTTTCGAGT 60323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620692864756480