Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq109 95.1 1e-14 >seq109 Length=251363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 284/435 (65%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 106937 |||| | ||||| || ||||||||||| ||||||| ||| | || ||| ||| | Sbjct 60323 ACTCGAAAATATCTGCATGCCATGGCTCGAGATAGATTGCAAAAGCTCCTGGTCGTTTAT 60382 Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997 || |||||| || || || || || ||| ||||||| | |||||||| | | Sbjct 60383 TGCCGCCTTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACC 60442 Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 107057 ||| ||| || ||||| || | ||| ||| | |||| | | | ||| | || Sbjct 60443 CATTGGATGTGCCGTTTGTGCCGCCAATCAAAGAACCAGTGGCCCGAATTTTATGTACGT 60502 Query 107058 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 107117 || || || || ||||| | ||| || ||| | ||||| | | | | || |||| | Sbjct 60503 TCAAACCGATTCCTCCAGCACTCTTCGATATTAGAGCACATTGCTTCAATGTATCATAAA 60562 Query 107118 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 107177 ||||| || || ||||| | | | | || || || || | |||||| | | Sbjct 60563 TACCGGCAATCGAATCCTCACTCATCGTCAACAGAAAACATGATGAAAGCTGCGGCCATA 60622 Query 107178 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACATCTTG 107236 |||| ||||| || || | ||||||| ||| ||| |||| ||| | || ||| Sbjct 60623 GTGTTCCAGCGTTAAACATTGTTGGTGATGCATGAGTGAA-ATATCGTTCACTCATTAGA 60681 Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296 | ||| || || | | | ||| || || || || || || |||| || || |||||| Sbjct 60682 TTGTACGTTTCAATAGCTGCATCGATATCCTCGCCATGAATACCGACCGCAACCCGCATA 60741 Query 107297 AACATGTATTGGGGT 107311 | ||||| ||| ||| Sbjct 60742 AGCATGTGTTGTGGT 60756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589933719532160