Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq822 95.1 1e-14 >seq822 Length=101035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| || || ||||||||||| ||||| || || || || |||||||| || ||||| Sbjct 47216 CTTACCCGCGAAAATCAAACGCTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGATTTT 47157 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| | || | ||||| || | || ||||| | || | || || || || Sbjct 47156 TGTCTTCACATTCTCAATGGTGTCCGAAGCCTCAACTTCTAATGTTATGGTCTTTCCCGT 47097 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | |||||||||||||||||||| | | |||||| Sbjct 47096 AAGCGTTTTTACAAATATCTGCATCCCTCCTCGAAGA 47060 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 |||||||| || |||| | ||| ||||| || || || ||||||||||| ||||| || Sbjct 45677 TTACCTGCGAAAATCAGCCTCTGCTGATCCGGTGGGATCCCTTCTTTATCCTGAATCTTC 45618 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || || | ||||||||| ||||| | || || || ||| Sbjct 45617 GCCTTGACATTCTCAATTGTATCCGAGGCTTCCACTTCGAGAGTAATGGTCTTTCCAGTT 45558 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | |||||| ||||| || ||||| | | |||||| Sbjct 45557 AGAGTTTTCACAAAGATTTGCATTCCTCCACGAAGA 45522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396247567559088