Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq109 114 7e-21 >seq109 Length=251363 Score = 114 bits (126), Expect = 7e-21 Identities = 264/389 (68%), Gaps = 8/389 (2%) Strand=Plus/Plus Query 26021 TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCT 26080 || |||||||||| |||||||| || | |||||| |||||| ||| || ||| Sbjct 60325 TCGAAAATATCTGCATGCCATGGCTCGAGATAGATTGCAAAAGCTCCTGGTCGTTTATTG 60384 Query 26081 CCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140 || |||||||| ||||||| ||||| | ||| | || ||||||||||| || ||| Sbjct 60385 CCGCCTTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACCCA 60444 Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200 | || |||||||||| |||| || || || | | ||| | || | | Sbjct 60445 TTGGATGTGCCGTTTGTGCCGCCAATCAAAGAACCAGTGGCCCGAATTTTATGTACGTTC 60504 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT-CTGAAACTGTATCGAAAAT 26259 | ||||||||| ||||| | || || || ||||| | || || |||||| |||| Sbjct 60505 AAACCGATTCCTCCAGCACTCTTCGATATTAGAGCACATTGCTTCAA-TGTATCATAAAT 60563 Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCG--AATGA 26317 || || ||| | |||| || | |||||| || || | |||| || | Sbjct 60564 ACCGGCAATCGAATCCTCACTCATCGTCAACAGAAAACATGATGAAAGCTGCGGCCAT-A 60622 Query 26318 GTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCA-AAGC 26376 | |||||| | ||||| | ||| |||| |||||||| |||||| |||||||| || Sbjct 60623 G-TGTTCCAGCGTTAAACATTGTTGGTGATGCATGAGTGAAATATCGTTCACTCATTAGA 60681 Query 26377 TGTATAAGTTTCAAGAACTTCATCGATAT 26405 | | || ||||||| | || ||||||||| Sbjct 60682 T-TGTACGTTTCAATAGCTGCATCGATAT 60709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253020312222800