Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq822 93.3 8e-14 >seq822 Length=101035 Score = 93.3 bits (102), Expect = 8e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||| || ||||| | ||||| || || ||||| || ||||||||||| || || || Sbjct 45677 TTACCTGCGAAAATCAGCCTCTGCTGATCCGGTGGGATCCCTTCTTTATCCTGAATCTTC 45618 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 || ||||| || ||||| || | ||| ||||| ||||||||||| || |||||| Sbjct 45617 GCCTTGACATTCTCAATTGTATCCGAGGCTTCCACTTCGAGAGTAATGGTCTTTCCAGTT 45558 Query 172047 AATGTTTTAATGAATATCTGCATT 172070 | ||||| | || || |||||| Sbjct 45557 AGAGTTTTCACAAAGATTTGCATT 45534 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||| || ||||| | ||||| || |||||||| || || || || || || || || Sbjct 45977 TTACCTGCGAAAATAAGCCTCTGCTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTTC 45918 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 || ||||| || ||||| || | ||| ||||| ||||||||||| || |||||| Sbjct 45917 GCCTTGACATTCTCAATTGTATCCGAGGCTTCCACTTCGAGAGTAATGGTCTTTCCAGTT 45858 Query 172047 AATGTTTTAATGAATATCTGCATT 172070 | ||||| | || || |||||| Sbjct 45857 AGAGTTTTCACAAAGATTTGCATT 45834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905063770147200