Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2031 89.7 4e-13 >seq2031 Length=37572 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGT 29723 ||||||||| || || ||||||||||||||||||| || ||| ||| |||| | || Sbjct 5095 TTGCTGATCGGGAGGGATACCCTCTTTGTCTTGTATCTTCGCTTTAACATTTTCGATGGT 5154 Query 29724 GTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTG 29783 ||| || || || |||||||| || ||||| ||||| | || || ||||| || || Sbjct 5155 GTCCGATGCCTCAACCTCAAGAGTGATGGTTTTTCCAGTGAGAGTCTTCACAAAAATTTG 5214 Query 29784 CAT-TTTAAAA 29793 ||| | ||||| Sbjct 5215 CATATCTAAAA 5225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385189228020144