Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq109 123 6e-23 >seq109 Length=251363 Score = 123 bits (136), Expect = 6e-23 Identities = 297/441 (67%), Gaps = 9/441 (2%) Strand=Plus/Minus Query 110363 TGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAA 110422 |||||| || ||||||||| || | || |||||| | ||||||||||| | ||||| | Sbjct 60762 TGAACGACCACAACACATGCTTATGCGGGTTGCGGTCGGTATTCATGGCGAGGATATCGA 60703 Query 110423 AGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCTA 110481 || | ||||||| || || || | ||| || || | | | |||||| | || | Sbjct 60702 TGCAGCTATTGAAACGTACAATCTAATGAGT-GAACGATATTTCACTCATGCATCACCAA 60644 Query 110482 CCCTATTTAACGCAGGAAC-TAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 | | |||||||| ||||| |||| | || | | || || ||||| | || Sbjct 60643 CAATGTTTAACGCTGGAACACTATGGCCG-CAGCTTTCATCATGTTTTCTGTTGACGATG 60585 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 | || ||||| |||| |||||||||||| | | || || |||||| || || || Sbjct 60584 AGTGAGGATTCGATTGCCGGTATTTATGATACATTGAAGCAATGTGCTCTAATATCGAAG 60525 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA-TCGC 110659 | |||||||||| ||| | |||| ||| | ||||| | | || | | | || Sbjct 60524 AGTGCTGGAGGAATCGGTTTGAACGTACATAAAATTCGGGCCACTGGTTCTTTGATTGGC 60465 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 || | || || | || | ||| | |||||||||||| | || | |||| | ||||| Sbjct 60464 GGCA-CAAACGGCACATCCAATGGGTTGGTTCCAATGTTACGCGTATACAACAATACTGC 60406 Query 110720 AAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 ||| || ||||||| || ||| || || | ||||| ||||||||||| || Sbjct 60405 TCGATACGTTGATCAAGGCGGCAATAAACGACCAGGAGCTTTTGCAATCTATCTCGAGCC 60346 Query 110777 TTGGCATTCAGATATATTTGA 110797 |||||| ||||||| || || Sbjct 60345 ATGGCATGCAGATATTTTCGA 60325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186715724647024