Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq109 190 3e-43 >seq109 Length=251363 Score = 190 bits (210), Expect = 3e-43 Identities = 306/440 (70%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | |||||| | ||||||||| || ||||| ||||| | | |||| |||||||||| Sbjct 60323 ACTCGAAAATATCTGCATGCCATGGCTCGAGATAGATTGCAAAAGCTCCTGGTCGTTTAT 60382 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 | || || ||||| | |||| || || || || || || | |||||||||| | | Sbjct 60383 TGCCGCCTTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACC 60442 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGG 78276 | || ||||| || ||||| || ||| || ||| | || ||||| ||| | | Sbjct 60443 CATTGGATGTGCCGTTTGTGCCGCCAATCAAAGAACCAGTGGCCCGAATTTTATGTACGT 60502 Query 78277 ATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGA 78336 | || |||||||| || |||| ||||||||||| || | ||||||||||| || | Sbjct 60503 TCAAACCGATTCCTCCAGCACTCTTCGATATTAGAGCACATTGCTTCAATGTATCATAAA 60562 Query 78337 TACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 78396 |||| | || || || |||| | | |||||||| || | || | | Sbjct 60563 TACCGGCAATCGAATCCTCACTCATCGTCAACAGAAAACATGATGAAAGCTGCGGCCATA 60622 Query 78397 CAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGAT 78456 ||||| || ||||| | ||| || |||||||| || || || |||| | ||||| Sbjct 60623 GTGTTCCAGCGTTAAACATTGTTGGTGATGCATGAGTGAAATATCGTTCACTCATTAGAT 60682 Query 78457 TGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCA 78516 |||| ||||||||||||| || || ||| |||||| || ||||| || ||||| | Sbjct 60683 TGTACGTTTCAATAGCTGCATCGATATCCTCGCCATGAATACCGACCGCAACCCGCATAA 60742 Query 78517 ACATATGCTGAGGTCTTTCA 78536 ||| || || |||| |||| Sbjct 60743 GCATGTGTTGTGGTCGTTCA 60762 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165 || |||||||| || || ||||| || || || || | |||||| || |||| ||||| Sbjct 58708 AGCAGATGAGGGTTCACAATTTGGAAATCACCCGAAAGTACTCTGCGGCTGTAGATATTC 58767 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 || || || || | ||||| ||||| || | |||||| || || || ||||||||| Sbjct 58768 GAAGTGTACGGCTCAATGGATTCGTTGTTGCCAAGAATTTGCGCCGTCGATGCAGTTGGC 58827 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260 || ||||| | ||||||||| |||| | |||||| Sbjct 58828 ATCGGTGCAAGCAATAAACTGTTTCGTACACCATG 58862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694613365429760