Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angiostrongylus_20costaricensis_20[genbank_20GCA_5F000951015.1_20201 4-09-24] 6,384 sequences; 262,782,696 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq109 188 1e-42 >seq109 Length=251363 Score = 188 bits (208), Expect = 1e-42 Identities = 305/439 (69%), Gaps = 0/439 (0%) Strand=Plus/Plus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | |||||| | ||||||||| || ||||| || || | | | || |||||||||| Sbjct 60323 ACTCGAAAATATCTGCATGCCATGGCTCGAGATAGATTGCAAAAGCTCCTGGTCGTTTAT 60382 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||| | |||| ||||| || || || || | |||||||||| | | Sbjct 60383 TGCCGCCTTGATCAACGTATCGAGCAGTATTGTTGTATACGCGTAACATTGGAACCAACC 60442 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAG 76871 | || ||||| || ||||| || ||| || ||| || ||||| ||| | Sbjct 60443 CATTGGATGTGCCGTTTGTGCCGCCAATCAAAGAACCAGTGGCCCGAATTTTATGTACGT 60502 Query 76872 ATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931 | || |||||||| || | || || ||||||||||| | |||||||| ||||| | Sbjct 60503 TCAAACCGATTCCTCCAGCACTCTTCGATATTAGAGCACATTGCTTCAATGTATCATAAA 60562 Query 76932 TGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991 | || | || ||| || |||| | | |||||||| || | || | | Sbjct 60563 TACCGGCAATCGAATCCTCACTCATCGTCAACAGAAAACATGATGAAAGCTGCGGCCATA 60622 Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051 ||||| || ||||||| ||| || |||||||||||||| || |||| | ||||| Sbjct 60623 GTGTTCCAGCGTTAAACATTGTTGGTGATGCATGAGTGAAATATCGTTCACTCATTAGAT 60682 Query 77052 TGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCA 77111 |||| ||||||||| |||| || |||||| |||||| || || || || ||||| | Sbjct 60683 TGTACGTTTCAATAGCTGCATCGATATCCTCGCCATGAATACCGACCGCAACCCGCATAA 60742 Query 77112 ACATATGCTGAGGTCGTTC 77130 ||| || || |||||||| Sbjct 60743 GCATGTGTTGTGGTCGTTC 60761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712877507834880