Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 6e-16 >seq16 Length=240792 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| |||||| || ||||| |||||||| || || |||| Sbjct 42338 AGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCT 42279 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | || ||||| ||||||||||| ||||| ||||| || | || ||| ||||| Sbjct 42278 TCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCC 42219 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||| | || | |||| ||| | || || || || | ||||| || Sbjct 42218 TGGATTTTAGCCTTCACATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTC 42159 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || ||||| ||||||||||| Sbjct 42158 TTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322906607832800