Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13514 98.7 1e-15 >seq13514 Length=1612 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 97134 TACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGCACGAGAACTGTGGAAGGCCAT 97192 |||||| ||| || || || ||| || | | |||| || || || ||||| | || || Sbjct 153 TACGAGGCAGAAGGTCGTTATCGTAAG-CAAATCGAAGCGCGTAAAGTGTGGGAAGCAAT 211 Query 97193 CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG-AATC 97251 ||||||| | || | |||||||| ||| || || |||| || ||| | ||| |||| Sbjct 212 CGTGACGTCGCAAATCGAGACTGGTGTTCCTTATATGGTCTATAAAGATGC-GTGCAATC 270 Query 97252 GCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTG 97311 | || || ||| | |||||||||||||| |||||||||||||||| ||||| | Sbjct 271 GTAAGTCGAATCAAAAGAATTTGGGCACCATCAAATGCTCCAATCTGTGCACTGAAATCG 330 Query 97312 TAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCG 97358 | || ||| | ||||| ||| ||| ||||| | |||| ||| Sbjct 331 TCGAATACTCGTCTCCAACCGAAGTGGCCGTTTGTAATTTGGCGTCG 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740670097603800