Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 2e-12 >seq16 Length=240792 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||| | | ||||||||||||||| ||||| |||||||| | ||||| || |||||| Sbjct 40238 AAGATCAGACGTTGCTGATCTGGAGGGATACCCTCTTTGTCTTGGATTTTGGCTTTGACG 40179 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 ||| ||||| | || || || | ||||| || || |||||||| |||||| Sbjct 40178 TTCTCGATGGTGTCCGAAGCCTCCACCTCGAGTGTGATAGTCTTGCCAGTAAGTGTTTTC 40119 Query 94994 ACAAAGATCTGCATGCTT 95011 || || || ||||| ||| Sbjct 40118 ACGAAAATTTGCATACTT 40101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448055819101800