Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7237 96.9 9e-15 >seq7237 Length=2870 Score = 96.9 bits (106), Expect = 9e-15 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 111316 TTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGT 111375 ||||| | || |||||||| || || |||| ||| || ||||||||||| |||||| Sbjct 772 TTCCATTGCTGACAACAAAACGTGTCTACTGGACGGGTATCGTCGAAGAACTGTTGTGGT 713 Query 111376 TTATTCGCGGAAGTACAAATGCAAATGAACTTG-CAGCAAAAAATGTAAAAATTTGGGAT 111434 ||||||| || ||| || |||| | ||||| ||| ||| ||||| || ||||||||| Sbjct 712 TTATTCGTGGTGATACGAACTCAAA-GCACTTGTCAGAAAAGAATGTCAAGATTTGGGAT 654 Query 111435 GGAAATGGATCACGTGACTT 111454 | |||||||| || || || Sbjct 653 GCCAATGGATCTCGCGAATT 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302652149347910