Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq16 161 2e-34
seq6064 122 2e-22
seq739 118 2e-21
seq19194 89.7 9e-13
seq1030 87.8 3e-12
seq14215 86.0 1e-11
seq10968 86.0 1e-11
seq8721 86.0 1e-11
seq2824 86.0 1e-11
>seq16
Length=240792
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || || | || | ||| || ||||| ||||||||||||||||| ||||||
Sbjct 42353 CCTCCACGGAGACGGAGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAG 42294
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | || || |||||||| ||||| | |||||||| ||||||
Sbjct 42293 AGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGA 42234
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| || ||||| || || || ||||| || |||||| || || | | || ||
Sbjct 42233 ATGCCCTCTTTGTCCTGGATTTTAGCCTTCACATTCTCGATCGTATCCGACGCCTCCACC 42174
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || || |||||||| ||||| ||||||||
Sbjct 42173 TCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127
Score = 123 bits (136), Expect = 5e-23
Identities = 112/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| ||||| | |||||| ||||||||||| ||||| ||||| || |||||||||
Sbjct 40933 CCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCTTCTTTGTCCTGGATCTTTGCC 40874
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || |||||||| || | | || ||||||| ||||| || || ||||| |||
Sbjct 40873 TTCACATTTTCGATGGTATCCGACGCCTCAACTTCCAGAGTGATCGTCTTACCCGTTAGG 40814
Query 68442 GTCTTGACGAATATCTGCATT 68462
|| |||||||| |||||||||
Sbjct 40813 GTTTTGACGAAGATCTGCATT 40793
Score = 114 bits (126), Expect = 2e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375
||| | || || || ||||||| ||| || || |||||||| |||||||||||||| |||
Sbjct 41637 TGCGTACCCGCAAAGATGAGTCGTTGCTGATCCGGTGGAATCCCTTCCTTGTCTTGGATC 41578
Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCC 68435
|| || || || |||||| ||||| | || ||| || || | |||||| || || ||
Sbjct 41577 TTGGCTTTCACATTCTCGATCGTGTCGGATGCTTCCACCTCAAGGGTGATCGTCTTACCG 41518
Query 68436 GTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| ||||| ||||||||
Sbjct 41517 GTAAGCGTCTTAACGAAGATCTGCAT 41492
Score = 105 bits (116), Expect = 1e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || || | ||||| || |||||||| || ||||||||||| |||||
Sbjct 41956 TTACCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATACCCTCCTTGTCTTGGATCTTC 41897
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| || |||||| || || | | ||| || || | || |||||||| ||||||
Sbjct 41896 GCCTTCACATTCTCGATCGTATCCGACGCTTCCACCTCAAGCGTTATGGTTTTACCCGTG 41837
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
|| || ||||||||||| |||||
Sbjct 41836 AGCGTTTTGACGAATATTTGCAT 41814
Score = 102 bits (112), Expect = 2e-16
Identities = 120/161 (75%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361
|| ||| ||| || |||| || ||||| || || | ||| || |||||||| || || |
Sbjct 41306 TCTCATGTTC-AAGAGCTTACCAGCGAAGATCAGACGTTGCTGATCGGGTGGGATTCCCT 41248
Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421
| ||||| ||||||||||| || || ||||||||| || | | || || || | ||
Sbjct 41247 CTTTGTCCTGAATCTTTGCTTTCACATTCTCGATGGTATCGGAAGCCTCAACCTCGAGGG 41188
Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || || || ||||| ||||| || ||||| ||||||
Sbjct 41187 TGATCGTCTTACCGGTGAGCGTCTTAACAAATATTTGCATT 41147
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || || | |||||| || || || || ||||||||||| |||||||| |||
Sbjct 40582 CCAGCGAAGATCAGACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCCTGAATCTTGGCC 40523
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| |||||| || || | | || || || | |||||| || || || || ||
Sbjct 40522 TTGACGTTCTCGATCGTATCCGAAGCCTCCACCTCAAGGGTGATCGTCTTGCCAGTCAGC 40463
Query 68442 GTCTTGACGAATATCTGCAT 68461
|| || ||||| || |||||
Sbjct 40462 GTTTTAACGAAAATTTGCAT 40443
>seq6064
Length=3385
Score = 122 bits (134), Expect = 2e-22
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| ||||| ||||| || | |||||| || || ||||| || ||||| |||||||||||
Sbjct 167 CTTACCGGCAAATATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCTTGAATCTT 226
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|| ||||| |||||||| || | ||| || || || | ||| || || || |||||
Sbjct 227 GGCTTTGACATTTTCGATGGTATCGGATGACTCAACCTCAAGGGTTATCGTCTTACCCGT 286
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
|||||||||||||| |||||||||
Sbjct 287 TAGGGTCTTGACGAAGATCTGCATT 311
>seq739
Length=22138
Score = 118 bits (130), Expect = 2e-21
Identities = 113/145 (78%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || ||||| || | | ||||||||| ||||| ||||||||||| || ||||| ||
Sbjct 1442 CTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTT 1383
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
||||||||| ||||| || || | || ||| ||||| | ||||| ||||| || ||
Sbjct 1382 TGCCTTGACATTTTCGATTGTATCCGATGCTTCCACTTCTAGTGTGATCGTTTTGCCGGT 1323
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
|| ||||||||||| || ||||||
Sbjct 1322 CAGTGTCTTGACGAAAATTTGCATT 1298
>seq19194
Length=1157
Score = 89.7 bits (98), Expect = 9e-13
Identities = 73/88 (83%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 84440 TCTGGGTGACGAGAGCG--CCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTT 84497
|||||||| | | |||| |||||||||||||||||| ||||| | || ||||||| ||
Sbjct 716 TCTGGGTGGCAACAGCGTGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTG 657
Query 84498 GTGGTCGTGGGTTCGAGCCCCACATCGG 84525
| |||| ||||||||||||| ||||||
Sbjct 656 GCTGTCGCGGGTTCGAGCCCCGCATCGG 629
>seq1030
Length=16607
Score = 87.8 bits (96), Expect = 3e-12
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 84449 CGAGAGCG-CCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGG 84507
|||| ||| |||||||||||||||||| ||||| | || ||||||| || | |||| ||
Sbjct 7168 CGAGTGCGGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGG 7227
Query 84508 GTTCGAGCCCCACATCGGGC 84527
||||||||||| ||||||||
Sbjct 7228 GTTCGAGCCCCGCATCGGGC 7247
>seq14215
Length=1538
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 1000 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 941
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 940 CCCGCATCGGGC 929
>seq10968
Length=1959
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 1051 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 992
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 991 CCCGCATCGGGC 980
>seq8721
Length=2414
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 1101 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1042
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 1041 CCCGCATCGGGC 1030
>seq2824
Length=6685
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 5993 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 5934
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 5933 CCCGCATCGGGC 5922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921138490638600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |