Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 3e-15 seq739 84.2 2e-11 >seq16 Length=240792 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||| ||||| || ||| | || ||| ||||| |||||||| || Sbjct 42323 GTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCG 42264 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | ||||||||||||||||| || |||||||| |||||||| || || || Sbjct 42263 GCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTAGCCTTC 42204 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || || | | || || || | ||| | ||| || ||||| || || Sbjct 42203 ACATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTC 42144 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 42143 TTCACGAAGATCTGCATG 42126 >seq739 Length=22138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 |||||||| |||| | || |||||||| || || ||||| ||||| || |||||| Sbjct 1782 TTACCAGCAAAGATCAACCGTTGTTGGTCTGGTGGGATGCCCTCTTTATCCTGAATCTTC 1723 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 |||| | || | || || | | |||||| |||| || | ||||||||||||| Sbjct 1722 GCCTTTACATTCTCGATTGTATCTGACGCTTCGACCTCCAACGTGATCGTTTTGCCGGTC 1663 Query 114360 AGAGTTTTTACAAAAATCTGCATG 114383 || || || |||||||| |||||| Sbjct 1662 AGTGTCTTGACAAAAATTTGCATG 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419919318102060