Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq16 125 7e-24 >seq16 Length=240792 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || ||||||||||| ||||| || || | || |||||| ||||| Sbjct 42338 AGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCT 42279 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || |||||||| ||||||| ||||| ||||| || ||||| || ||||| || Sbjct 42278 TCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCC 42219 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| ||| | ||||| || ||||| || | || | ||| Sbjct 42218 TGGATTTTAGCCTTCACATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTC 42159 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | || || ||||| || ||||| Sbjct 42158 TTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499382455252200