Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq13514 96.9 3e-15
seq16 91.5 1e-13
>seq13514
Length=1612
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/216 (71%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 153545 AAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGA 153604
|||||| ||||||| | || ||||| || | ||| | ||||||| ||||| ||
Sbjct 431 AAGTTTGGCGAAATCGAACTTCTTTTCG--GATGTC-ACGAAGCGATTCAACGCAATCGA 375
Query 153605 CGCCAGATTACAGACGGCCGTCTCT-TCGGCGTCGCTGTACTGCACGATCTCGGCGCAGA 153663
||||| |||||| |||||| || | || | || ||| | ||||| || | ||| |
Sbjct 374 CGCCAAATTACAAACGGCCACTTCGGTTGGAGACGA-GTATTCGACGATTTCAGTGCACA 316
Query 153664 GGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTT 153723
| ||| |||||| ||| ||||||||| | ||||| || ||||||||||| ||||
Sbjct 315 GATTGGAGCATTTGATGGTGCCCAAATTCTTTTGATTCGACTTACGATTGCACGCATCTT 256
Query 153724 TGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 153759
| ||| ||| || || | || ||||||| |||||
Sbjct 255 TATAGACCATATAAGGAACACCAGTCTCGATTTGCG 220
>seq16
Length=240792
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| || ||||| ||||| |||||| | || || ||| ||||||||||| ||||
Sbjct 42320 GATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCG 42261
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || |||||||||||||| || || || || |||||||| |||||| || |
Sbjct 42260 AAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTAGCCTTCACA 42201
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | || || | || ||||||||| | || | ||| || || || || || ||
Sbjct 42200 TTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTC 42141
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 42140 ACGAAGATCTGCATG 42126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496001831223600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |