Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 4e-15 >seq16 Length=240792 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| || |||||||| || ||||| |||| ||||| || ||||||||||| Sbjct 42317 TCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCGAAA 42258 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| ||||| | || | || ||| |||||| ||| || ||| | || Sbjct 42257 ATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTAGCCTTCACATTC 42198 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||| || || ||||| || | ||||| || || || || || || || || Sbjct 42197 TCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTCACG 42138 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 42137 AAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564941614512600