Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq16 132 5e-26 >seq16 Length=240792 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || |||||| | || || ||||| | Sbjct 42127 ATGCAGATCTTCGTGAAGACCCTAACCGGGAAGACGATCACCCTTGAGGTGGAGGCGTCG 42186 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | ||||||| ||||||||||| ||||| | |||||| Sbjct 42187 GATACGATCGAGAATGTGAAGGCTAAAATCCAGGACAAAGAGGGCATTCCACCAGACCAA 42246 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| |||||||| || || |||| ||||||||| |||||| ||| Sbjct 42247 CAGCGTCTCATTTTCGCCGGCAAACAACTCGAAGACGGTCGCACCCTCTCCGACTATAAC 42306 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || || || | ||||| ||| Sbjct 42307 ATCCAAAAAGAATCCACTCTCCACCTTGTGCTCCGT 42342 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || || |||||||| || || || |||||| |||| || ||||| | Sbjct 41147 AATGCAAATATTTGTTAAGACGCTCACCGGTAAGACGATCACCCTCGAGGTTGAGGCTTC 41206 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | | |||| ||| || | |||||||||||||| || |||| || Sbjct 41207 CGATACCATCGAGAATGTGAAAGCAAAGATTCAGGACAAAGAGGGAATCCCACCCGATCA 41266 Query 38363 ACAGCGGCTCATTTACGCGGGCAA 38386 || || || || | ||| || || Sbjct 41267 GCAACGTCTGATCTTCGCTGGTAA 41290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499910178019200