Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq31693 104 3e-17 seq13514 104 3e-17 >seq31693 Length=667 Score = 104 bits (114), Expect = 3e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 ||| ||||||||||||| || ||||||||||||| || || || ||||| ||||| ||| Sbjct 384 GGTGTTCGTAACAGTCTCCTGCTGGCACCAATGCCTACCGCATCAACCGCCCAAATATTG 443 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 || ||||| ||| |||| ||||| || ||||| || |||||| Sbjct 444 GGCAATAACGAAGGCTTCGAACCGTATACGACTAATATCTAT 485 >seq13514 Length=1612 Score = 104 bits (114), Expect = 3e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 ||| ||||||||||||| || ||||||||||||| || || || ||||| ||||| ||| Sbjct 1329 GGTGTTCGTAACAGTCTCCTGCTGGCACCAATGCCTACCGCATCAACCGCCCAAATATTG 1388 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 || ||||| ||| |||| ||||| || ||||| || |||||| Sbjct 1389 GGCAATAACGAAGGCTTCGAACCGTATACGACTAATATCTAT 1430 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 112275 GTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAA 112334 |||||| |||| || | | ||| |||| |||||||||| || |||||| | || ||| Sbjct 198 GTGTGGGAAGCAATCGTGACGTCGCAAATCGAGACTGGTGTTCCTTATATGGTCTATAAA 257 Query 112335 GACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTC 112394 || || || || | ||| ||||||||||||||||| ||||| | ||||| || Sbjct 258 GATGCGTGCAATCGTAAGTCGAATCAAAAGAATTTGGGCACCATCAAATGCTCCAATCTG 317 Query 112395 TGTACAGAAATCTTGGAAT 112413 || || |||||| | |||| Sbjct 318 TGCACTGAAATCGTCGAAT 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620416471443600