Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq31693 104 3e-17 seq13514 104 3e-17 >seq31693 Length=667 Score = 104 bits (114), Expect = 3e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 |||||| || ||||| || ||||| |||| ||| ||||| ||||| ||||| ||||| || Sbjct 485 ATAGATATTAGTCGTATACGGTTCGAAGCCTTCGTTATTGCCCAATATTTGGGCGGTTGA 426 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC 106035 || || ||||||||||||| || ||||||||||||| ||| Sbjct 425 TGCGGTAGGCATTGGTGCCAGCAGGAGACTGTTACGAACACC 384 >seq13514 Length=1612 Score = 104 bits (114), Expect = 3e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 |||||| || ||||| || ||||| |||| ||| ||||| ||||| ||||| ||||| || Sbjct 1430 ATAGATATTAGTCGTATACGGTTCGAAGCCTTCGTTATTGCCCAATATTTGGGCGGTTGA 1371 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC 106035 || || ||||||||||||| || ||||||||||||| ||| Sbjct 1370 TGCGGTAGGCATTGGTGCCAGCAGGAGACTGTTACGAACACC 1329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589671023206200