Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 1e-11 >seq16 Length=240792 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||||||||| || ||| | || | || || || ||||| ||||| || Sbjct 42318 TTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCGAA 42259 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | ||||| ||||| || || || || | Sbjct 42258 AATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTAGCCTTCAC--A 42201 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| || ||||| || || | ||| || || || || || || |||||| Sbjct 42200 TTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTC 42141 Query 34968 ACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 42140 ACGAAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324467408393640