Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq739 114 1e-20 seq16 111 1e-19 seq6064 102 6e-17 >seq739 Length=22138 Score = 114 bits (126), Expect = 1e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 101323 TTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAAT 101382 || |||||| || || |||||||| ||||| || || || |||||||| ||||| ||||| Sbjct 1445 TTACTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTATCCTGAAT 1386 Query 101383 TTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 |||| || ||| |||| | || || || | ||||||||| || |||| ||||||||| Sbjct 1385 TTTTGCCTTGACATTTTCGATTGTATCCGATGCTTCCACTTCTAGTGTGATCGTTTTGCC 1326 Query 101443 GGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 ||| | || || || || || ||||| ||| Sbjct 1325 GGTCAGTGTCTTGACGAAAATTTGCATTGTT 1295 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| ||||| || ||||| || || || ||||| |||||||| ||||| || Sbjct 1783 CTTACCAGCAAAGATCAACCGTTGTTGGTCTGGTGGGATGCCCTCTTTATCCTGAATCTT 1724 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| | || | || || |||| ||| || || | |||| |||||||||||| Sbjct 1723 CGCCTTTACATTCTCGATTGTATCTGACGCTTCGACCTCCAACGTGATCGTTTTGCCGGT 1664 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| || |||||| Sbjct 1663 CAGTGTCTTGACAAAAATTTGCATG 1639 >seq16 Length=240792 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || ||||||||||| || || || |||| || || | | || || | ||| Sbjct 42329 TGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGT 42270 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||||||| || || |||||||| ||||| || || ||||| Sbjct 42269 TTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTA 42210 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || |||| ||||| ||||| |||| ||| || |||||| Sbjct 42209 GCCTTCACATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTT 42150 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 42149 AGGGTCTTCACGAAGATCTGCATG 42126 Score = 98.7 bits (108), Expect = 8e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 |||| || || || | ||| ||||||||||| ||||| |||||||| || || || ||| Sbjct 40935 TACCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCTTCTTTGTCCTGGATCTTTG 40876 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 || ||| |||| | || || |||| || ||||| ||||||| ||| || || |||| Sbjct 40875 CCTTCACATTTTCGATGGTATCCGACGCCTCAACTTCCAGAGTGATCGTCTTACCCGTTA 40816 Query 101448 AAGTTTTTACAAATATCTGCAT 101469 ||||| || || |||||||| Sbjct 40815 GGGTTTTGACGAAGATCTGCAT 40794 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| || | |||||||||||| || ||||| || || || ||||| || || Sbjct 41956 TTACCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATACCCTCCTTGTCTTGGATCTTC 41897 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || |||| |||||| ||||| || | ||||| || || Sbjct 41896 GCCTTCACATTCTCGATCGTATCCGACGCTTCCACCTCAAGCGTTATGGTTTTACCCGTG 41837 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || ||||| ||||| Sbjct 41836 AGCGTTTTGACGAATATTTGCAT 41814 >seq6064 Length=3385 Score = 102 bits (112), Expect = 6e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| |||||||||| ||| |||||||| || ||||| || || ||||||||||| || Sbjct 167 CTTACCGGCAAATATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCTTGAATCTT 226 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| |||| | || || || | || || ||||| || | ||| || || || Sbjct 227 GGCTTTGACATTTTCGATGGTATCGGATGACTCAACCTCAAGGGTTATCGTCTTACCCGT 286 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACG 101476 || || || || || |||||||| ||||| Sbjct 287 TAGGGTCTTGACGAAGATCTGCATTTTTACG 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396075530845785