Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq718 86.0 8e-12 >seq718 Length=22695 Score = 86.0 bits (94), Expect = 8e-12 Identities = 144/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| || || || |||||||| || || || || ||||||| | ||||| |||| Sbjct 6866 CACCATACGGTGACCGAGGATAGAAGGGAGTTGTTTCCTTCTGTGGTATTTCTTGTACCT 6925 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTA-TCTTCCATCTCAAGC 48192 |||| || | ||| || ||||||||||||| ||||| | || || || ||| || | Sbjct 6926 TACCGTACAATTCGGATGTTGATGCTTGATAGAAACGAATCTTATTCGTCAATC-CA--C 6982 Query 48193 AAACG-GACT-GCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACT 48250 || || || | || || | || | | || || | |||||| | | ||||||||| Sbjct 6983 AAGCGTGAATCGCGTCCAACAAACGTAACGTCCCAACTGCATCTACTTCAGCAGTATACT 7042 Query 48251 CGGGCATCTCAAACGAAACCTT 48272 |||| | ||||| || ||||| Sbjct 7043 CGGGTAGATCAAAGGATACCTT 7064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665144973846600