Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2116 107 2e-17 >seq2116 Length=8653 Score = 107 bits (118), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| ||| | | ||||| || |||| ||||| | ||||| | || Sbjct 5137 GCTTGGCGAGTTCTCCGGGGAGGATCAATCGGACGGACGTCTGCACTTCGCGAGATGAGA 5078 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| |||||||||| || |||| | |||| || |||| | Sbjct 5077 TGGTCGAGCGCTTGTTGTAGTGGGCCAGACGGCTTGCTTCGGCGGCGATACGTTCGAAGA 5018 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGT-TGGAGATGCCCACGTCGGGG 1254521 |||||||| ||||||||||||| ||||| | || || ||||| || ||| || Sbjct 5017 CATCGTTGACGAACGAGTTCATGATGGACAT-GGCTCGTGACGAGATTCCGGTGTCTGGA 4959 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| ||||| | ||| ||||||| | |||||| || Sbjct 4958 TGCACTTGCTTCAACACACGGTAGATGTAGACCGAGTAGGA 4918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6103692072990585