Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq26 96.9 3e-15 >seq26 Length=210183 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554 |||||| |||| || || || || |||| ||| || |||| ||||| ||||| || || Sbjct 18125 GGACGTTCAAGAGCTTTTGCAATCTCGGTCATATTTGCGATAACAGTTTTGATACCATTA 18066 Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||||| |||||||||||||| || || |||||||||||||| || |||| ||| Sbjct 18065 CCCTTGCCTTCGACCTTGGCTTGGAGTCGTGGCATTTTGTAGCGATAAAACGGGTC 18010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| ||||||||||||||| | | |||||||||||| || | |||||| ||||| || | Sbjct 18374 AGTTTCCGGGTTGTCACATGCAGCACACAACACAAATTTTCTGATGAATCCATCCAGAAT 18315 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 || |||| || | || || || || || ||||||| |||||||| ||| Sbjct 18314 ATCTTGTAGTTTGTTCGCATCATGCTCACCATTCACTATGAATCTCTCGTTTTTCATATC 18255 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | | ||||||||| || ||||| || || || || || ||||| Sbjct 18254 AAAGTTCGTTTGCGCACCTAGCTCACAACCAAAATATTTCGTCGG 18210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412630251548465