Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24]
42,005 sequences; 126,869,778 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2116 136 6e-26
seq747 116 6e-20
>seq2116
Length=8653
Score = 136 bits (150), Expect = 6e-26
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| || || || || |||||| |||| ||||| ||| | |
Sbjct 5176 TGTACTTGGTGACGGCCTTGGTGCCTTCCGATACAGCGTGCTTGGCGAGTTCTCCGGGGA 5117
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
||||| || |||| ||||| | ||||| | ||| || ||||||||| |
Sbjct 5116 GGATCAATCGGACGGACGTCTGCACTTCGCGAGATGAGATGGTCGAGCGCTTGTTGTAGT 5057
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||| |||| || |||| | |||| || |||| | |||||||| ||||||||||
Sbjct 5056 GGGCCAGACGGCTTGCTTCGGCGGCGATACGTTCGAAGACATCGTTGACGAACGAGTTCA 4997
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||| ||||| | | ||||| || ||| || ||||| ||||| | |||
Sbjct 4996 TGATGGACATGGCTCGTGACGAGATTCCGGTGTCTGGATGCACTTGCTTCAACAC 4942
>seq747
Length=21950
Score = 116 bits (128), Expect = 6e-20
Identities = 169/236 (72%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||| || || ||||||||||| || || | |||| ||| ||| | |
Sbjct 1291 TGTACTTGGTGACGGCTTTTGTGCCCTCTGAGACAGCATGTTTTGCCAATTCACCGGGGA 1350
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || |||| |||||||| ||||| | ||||| |||||||| |
Sbjct 1351 GAATAAGTCGAACGGAGGTCTGGACTTCGCGAGACGAAATCGTTGATCGCTTGTTGTAGT 1410
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||| || | || |||| |||| || || | | |||||| || ||||| ||||
Sbjct 1411 GAGCCAGACGACTTGCTTCGGCTGCGATACGCTCAAAGACGTCGTTCACGAACGAATTCA 1470
Query 1485650 TGATCGACATCG-ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|||||||||||| | | | ||||| || ||||| || || ||||| |||||
Sbjct 1471 TGATCGACATCGCACGAGAT-GAGATTCCGGTATCGGGATGAACTTGCTTCAGCAC 1525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7911778136565195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |