Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq16 82.4 7e-11 >seq16 Length=240792 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 ||||||| ||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct 40246 TACCAGCGAAGATCAGACGTTGCTGATCTGGAGGGATACCCTCTTTGTCTTGGATTTTGG 40187 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | || | ||||| | | || || || | || | |||||||| || | Sbjct 40186 CTTTGACGTTCTCGATGGTGTCCGAAGCCTCCACCTCGAGTGTGATAGTCTTGCCAGTAA 40127 Query 137390 ATGTTTTTACGAATATTTGCATA 137412 |||||| ||||| ||||||||| Sbjct 40126 GTGTTTTCACGAAAATTTGCATA 40104 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 137271 ACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTG 137330 |||||| ||||||||||||| ||||| ||||| || ||||| ||||| ||| || Sbjct 40583 ACCAGCGAAGATCAGACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCCTGAATCTTGGC 40524 Query 137331 TTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAA 137390 || | | || | ||| || | | || || |||| || | ||||||||| |||| Sbjct 40523 CTTGACGTTCTCGATCGTATCCGAAGCCTCCACCTCAAGGGTGATCGTCTTGCCAGTCAG 40464 Query 137391 TGTTTTTACGAATATTTGCATAGCT 137415 ||||| ||||| ||||||||| || Sbjct 40463 CGTTTTAACGAAAATTTGCATACCT 40439 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| || | ||| | || | || | || ||||||||||| ||||| || ||| Sbjct 42354 GCCTCCACGGAGACGGAGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGA 42295 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| ||||||||||||||| || || | || ||||| || || || || || Sbjct 42294 GAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGG 42235 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||||| |||||||| ||||| || | | || | ||| || | | || || Sbjct 42234 AATGCCCTCTTTGTCCTGGATTTTAGCCTTCACATTCTCGATCGTATCCGACGCCTCCAC 42175 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | |||||| ||||| | || || ||||| || ||||| Sbjct 42174 CTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488287483866000