Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq16 105 4e-18 >seq16 Length=240792 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || |||||| |||||||| ||||| || |||||||| ||||| | Sbjct 42342 ACGGAGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACC 42283 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | |||||| ||||| ||||| | |||||| || ||| | || | || ||||| Sbjct 42282 GTCTTCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTT 42223 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||||| |||| ||| || | || || | ||||| |||| |||| Sbjct 42222 GTCCTGGATTTTAGCCTTCA-CATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGA 42164 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || |||| || || || ||||||||||| Sbjct 42163 TCGTCTTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | |||||| ||||||||||| || || || ||||| || ||||||||||| Sbjct 41146 CCTCCGCGCAAACGCAACACCAAATGGAGGGTCGATTCCTTTTGGATATTGTAATCGGAT 41087 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAAT 33620 ||||| ||| | || ||||| |||||||| |||| ||| Sbjct 41086 AGTGTACGTCCATCTTCCAACTGTTTTCCTGCAACAAT 41049 Score = 82.4 bits (90), Expect = 5e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 41813 ACCACCTCGTAACCGTAACACCAAATGTAGAGTCGACTCTTTTTGAATGTTGTAATCGGA 41754 Query 33582 GAGTGTGCGTTCGTCGTC 33599 || || ||| | || || Sbjct 41753 CAGAGTACGTCCATCTTC 41736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328535724609600