Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 1e-14 seq13514 84.2 2e-11 >seq16 Length=240792 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| ||||| |||||| | ||| || |||||||| ||||| |||| Sbjct 42320 GATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCG 42261 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||| ||||| || ||||| ||||| || ||||| |||| Sbjct 42260 AAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATTTTAGCCTTCACA 42201 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || |||||| || | || | ||| || || || || || || Sbjct 42200 TTCTCGATCGTATCCGACGCCTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTC 42141 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 42140 ACGAAGATCTGCATG 42126 >seq13514 Length=1612 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 147454 TTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCT-TCGGCGTCGCTGTACTGCAC 147512 |||| || || ||||||| ||| || |||||| || | || | || ||| | || Sbjct 388 TTCAACGCAATCGACGCCAAATTACAAACGGCCACTTCGGTTGGAGACGA-GTATTCGAC 330 Query 147513 GATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCG 147572 |||||| | |||||| ||| |||||| ||| |||||||| | ||||| || || Sbjct 329 GATTTCAGTGCACAGATTGGAGCATTTGATGGTGCCCAAATTCTTTTGATTCGACTTACG 270 Query 147573 ATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 147622 ||||||||| ||||| ||| ||| || || | || ||||||| ||||| Sbjct 269 ATTGCACGCATCTTTATAGACCATATAAGGAACACCAGTCTCGATTTGCG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476360949331800