Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq16 116 2e-21 >seq16 Length=240792 Score = 116 bits (128), Expect = 2e-21 Identities = 173/239 (72%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 34472 AATC-GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTA 34530 |||| || ||| || | ||||| | ||| | ||||||||| || ||||| |||||| Sbjct 42362 AATCAGTAGCCTCCACGGAGACGGAGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTA 42303 Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590 || || || || || || ||||||| |||||||| ||||| || || | |||||||||| Sbjct 42302 TAGTCGGAGAGGGTGCGACCGTCTTCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGG 42243 Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT-CTT 34648 || || || | ||||| ||||| ||| ||| | || || | || || | | Sbjct 42242 TCTGGTGGAATGCCCTCTTTGTCCTGGAT-TTTAGCCTTCACATTCTCGATCGTATCCGA 42184 Query 34649 CGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||||| || | ||| ||||| || ||||||| || ||||| || ||||||||| Sbjct 42183 CGC-CTCCACCTCAAGGGTGATCGTCTTCCCGGTTAGGGTCTTCACGAAGATCTGCATG 42126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314568478607165