Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5982 96.9 5e-15 >seq5982 Length=3431 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 78464 TTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 ||||||||||| || || || || ||||||||| || || |||||||| |||| ||| Sbjct 1868 TTCAATAGCTGCATCGATATCTTCTTTATGAATTCCGACTGCGACACGCATAAACAAATG 1809 Query 78524 CTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 78583 ||| ||||||||||| | | | || | || | ||| || || ||||| ||||| Sbjct 1808 CTGCGGTCTTTCAACAGGCACACCGTTCAACTTGATCAAATACGAACGCTCCAATGTTTT 1749 Query 78584 AAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621 ||||||||||| || | |||||||| | |||| || Sbjct 1748 GAAACCAAAATACGTGAACGAAAAGTCACGGTCGTGAA 1711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694304055463200