Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5982 100 4e-16 >seq5982 Length=3431 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 77059 TTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 ||||||| |||| || ||||| || ||||||||| || ||||||||||| |||| ||| Sbjct 1868 TTCAATAGCTGCATCGATATCTTCTTTATGAATTCCGACTGCGACACGCATAAACAAATG 1809 Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 77178 ||| |||| ||| |||| | | || | || | ||| || || ||||| ||||| Sbjct 1808 CTGCGGTCTTTCAACAGGCACACCGTTCAACTTGATCAAATACGAACGCTCCAATGTTTT 1749 Query 77179 AAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216 ||||||||||| || | |||||||| | |||| || Sbjct 1748 GAAACCAAAATACGTGAACGAAAAGTCACGGTCGTGAA 1711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712560064881600