Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anisakis_20simplex_20[genbank_20GCA_5F000951095.1_202014-09-24] 42,005 sequences; 126,869,778 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq16 107 4e-18 >seq16 Length=240792 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || ||||| || |||||||||||||| || |||| | || | Sbjct 42345 GAGACGGAGCACAAGGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAGAGGGTGCG 42286 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || ||| |||||||| || || | ||| ||||| | | || || || Sbjct 42285 ACCGTCTTCGAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGTGGAATGCCCTC 42226 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || ||||| || ||| |||| | | || || ||| || ||||| || Sbjct 42225 TTTGTCCTGGATTTTAGCCTTCACATTCTCGATCGTATCCGACGCCTCCACCTCAAGGGT 42166 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||||||||||| |||||| Sbjct 42165 GATCGTCTTCCCGGTTAGGGTCTTCACGAAGATCTGCAT 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153199826265355