Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq108 134 1e-26 >seq108 Length=252163 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | |||||||||||| || ||||||||||||| ||||||| || ||||| Sbjct 244267 AGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCGTCC 244326 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 ||||| |||||||||||| | || |||| |||||| || || | || ||||| || Sbjct 244327 TCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTATCT 244386 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| |||||| | ||| |||||| | |||| |||| ||||| ||| Sbjct 244387 TGAATCTTGGCTTTCACATTCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATTGTC 244446 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||| || || || |||||||| Sbjct 244447 TTGCCTGTCAGCGTCTTCACGAAAATTTGCAT 244478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422096011334360