Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq108 134 1e-26
>seq108
Length=252163
Score = 134 bits (148), Expect = 1e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | || | |||||||||||| || ||||||||||||| ||||||| || |||||
Sbjct 244267 AGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCGTCC 244326
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
||||| |||||||||||| | || |||| |||||| || || | || ||||| ||
Sbjct 244327 TCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTATCT 244386
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| |||||| | ||| |||||| | |||| |||| ||||| |||
Sbjct 244387 TGAATCTTGGCTTTCACATTCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATTGTC 244446
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || | ||| || || || ||||||||
Sbjct 244447 TTGCCTGTCAGCGTCTTCACGAAAATTTGCAT 244478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422096011334360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |