Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq320 96.9 4e-15
seq31476 95.1 1e-14
seq30691 95.1 1e-14
seq27354 95.1 1e-14
seq21700 95.1 1e-14
seq10577 95.1 1e-14
seq2512 95.1 1e-14
seq1284 95.1 1e-14
seq467 95.1 1e-14
seq6 95.1 1e-14
seq17855 91.5 2e-13
seq108 87.8 2e-12
>seq320
Length=140168
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 96237 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 96296
Query 60126 TACTACCGAGGATTGAAT 60143
|||||||||||| || ||
Sbjct 96297 TACTACCGAGGACTGCAT 96314
>seq31476
Length=505
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 4 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 63
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 64 TACTACCGAGGA 75
>seq30691
Length=526
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 325 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 384
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 385 TACTACCGAGGA 396
>seq27354
Length=646
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 444 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 385
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 384 TACTACCGAGGA 373
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 291 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 232
Query 60126 TACTACCGAGGA 60137
|||| |||||||
Sbjct 231 TACTGCCGAGGA 220
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| | |||||||||||
Sbjct 598 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGACACTCACCACTA 539
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 538 TACTACCGAGGA 527
>seq21700
Length=937
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 16 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 75
Query 60126 TACTACCGAGGATTG 60140
|||||||||||| ||
Sbjct 76 TACTACCGAGGACTG 90
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 318 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 377
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 378 TACTACCGAGGA 389
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 469 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 528
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 529 TACTACCGAGGA 540
Score = 86.0 bits (94), Expect = 7e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
||||||||||||| |||||| | |||||||||||| ||||||||||| |||||||||||
Sbjct 785 GGGAATCGAACCCGGGTCTCGCACGTGACAGGCGGGGATACTCACCACGATACTACCGAG 844
Query 60136 GATTG 60140
|| ||
Sbjct 845 GACTG 849
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||| ||||| |||||| | ||||||||||| ||||||| |||||
Sbjct 623 CTCCCCGGCCGGGAATCCAACCCGGGTCTCGCACGTGACAGGCGCCGATACTCATCACTA 682
Query 60126 TACTACCGAGGATTG 60140
|||||| ||||| ||
Sbjct 683 TACTACGGAGGACTG 697
>seq10577
Length=2480
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 159 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 100
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 99 TACTACCGAGGA 88
>seq2512
Length=29856
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 4887 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 4828
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 4827 TACTACCGAGGA 4816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 5062 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 5003
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 5002 TACTACCGAGGA 4991
>seq1284
Length=53801
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 16654 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 16595
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 16594 TACTACCGAGGA 16583
>seq467
Length=112660
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 17629 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 17570
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 17569 TACTACCGAGGA 17558
>seq6
Length=785699
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 701162 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 701221
Query 60126 TACTACCGAGGATTG 60140
|||||||||||| ||
Sbjct 701222 TACTACCGAGGACTG 701236
>seq17855
Length=1205
Score = 91.5 bits (100), Expect = 2e-13
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 820 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 761
Query 60126 TACTACCGAG 60135
||||||||||
Sbjct 760 TACTACCGAG 751
Score = 84.2 bits (92), Expect = 2e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126
||| |||| ||||||||||| | |||||| | ||||||||||| ||||||||||||||
Sbjct 79 TCCCCGGCCGGGAATCGAACACGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTAT 20
Query 60127 ACTACCGAGGA 60137
||||| |||||
Sbjct 19 ACTACAGAGGA 9
>seq108
Length=252163
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| || |||| ||||||||||| || |||||||| ||||||||||| |
Sbjct 245453 CCTCCTCTCAATCGCAGCACCAAATGCAGCGTAGATTCCTTTTGTATATTGTAATCTGAT 245512
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054
||||| || |||| || ||||||||||| || |||||
Sbjct 245513 AGAGTGCGACCGTCTTCAAGCTGCTTACCTGCAAATAT 245550
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || || || || | ||| || || |||| || || || || || || ||
Sbjct 244287 CTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCGTCCTCCAGTTGTTTGCCCGCAAA 244346
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|||||||||||||| |||| ||| | | |||||| | | ||| | || | ||| |
Sbjct 244347 GATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTAT-CTTGAATCTTGGCTTTCACAT 244405
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
|| | | || ||| || ||||| || | || || || ||||| || |||||||| |
Sbjct 244406 TCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATTGTCTTGCCTGTCAGCGTCTTCA 244465
Query 43171 CAAAGATTTGCAT 43183
| || ||||||||
Sbjct 244466 CGAAAATTTGCAT 244478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571590945798800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |