Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1742 91.5 1e-13
>seq1742
Length=41667
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256
||||||||||| | || || |||||||| || | |||||| |||||| |||||| |
Sbjct 23012 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 22953
Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316
|| || | | | ||||| | |||||||| | ||| ||||| || || || |||
Sbjct 22952 TTTACATTCTCGATCGTGTCCAACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 22893
Query 45317 GTCTTCACAAAGATTTGCAT 45336
||||||||||| ||||||||
Sbjct 22892 GTCTTCACAAAAATTTGCAT 22873
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256
||||||||||| | || || |||||||| || | |||||| |||||| |||||| |
Sbjct 31293 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31352
Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316
|| || | | | ||||| | |||||||| | ||| ||||| || || || |||
Sbjct 31353 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31412
Query 45317 GTCTTCACAAAGATTTGCAT 45336
||||||||||| ||||||||
Sbjct 31413 GTCTTCACAAAAATTTGCAT 31432
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256
||||||||||| | || || |||||||| || | |||||| |||||| |||||| |
Sbjct 31597 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31656
Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316
|| || | | | ||||| | |||||||| | ||| ||||| || || || |||
Sbjct 31657 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31716
Query 45317 GTCTTCACAAAGATTTGCAT 45336
||||||||||| ||||||||
Sbjct 31717 GTCTTCACAAAAATTTGCAT 31736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394922517015910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |