Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq11 87.8 3e-12 >seq11 Length=636740 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 |||||| ||||||||||| ||| || | || ||||| |||||||||||| ||| Sbjct 136151 TTCGAATTCGTCTCCCCAGCAATCTTCAAGACCTCTGCATTCTGCAGGACACATCAGCGA 136092 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||| | || | || ||||| | |||||| | ||| |||| ||| | | | || Sbjct 136091 CCATTTACCGTTGTCTCGAACTCGCTGCATAAACAAATCCGGAACCCATAATCCGAAGAA 136032 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 |||||| | | ||| | | ||||| || |||||| | ||||| || | | | Sbjct 136031 TAGATCACGGCATCTCTCCAACTCGTCGCCAACATTCTTCCTCAGATCCAGATATTCGAA 135972 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 ||||| | |||||| ||||||| ||| ||||| | | | || ||||| Sbjct 135971 TATATCCGCATGCCAAGGTTCCAGGTAAATGGCGAAAGCACCTGGTCG 135924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717984096204400