Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq9998 105 1e-17 seq6022 105 1e-17 >seq9998 Length=2827 Score = 105 bits (116), Expect = 1e-17 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 || ||||| |||||||| || |||||||| || ||||||||||||||||| || |||||| Sbjct 297 GGAATCTTTTTTTCGGGAAGCTTTGCGGCGATATTTTGGCTCAAGAAGCGTGGCCTCATG 238 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 || ||| | |||||||| || ||| |||| || |||| |||| Sbjct 237 CCTGGATTAACGCACAGCAATGAGCTTATTTCAAGAGATGAGG 195 >seq6022 Length=9468 Score = 105 bits (116), Expect = 1e-17 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 || ||||| |||||||| || |||||||| || ||||||||||||||||| || |||||| Sbjct 7396 GGAATCTTTTTTTCGGGAAGCTTTGCGGCGATATTTTGGCTCAAGAAGCGTGGCCTCATG 7337 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 || ||| ||||||| || || ||| |||| || |||| |||| Sbjct 7336 CCTGGATTGACGCATAGCAATGAGCTTATTTCAAGAGATGAGG 7294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740765462659600