Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq108 93.3 4e-14 >seq108 Length=252163 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||||| | |||||||| ||||| || |||||||| || | ||||||||||||||| Sbjct 244900 AAGATTAGGCGCTGCTGATCAGGAGGTATCCCTTCTTTATCCTGGATTTTTGCCTTGACG 244959 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 ||| |||||||| || || || | |||||| || || || || | |||||| Sbjct 244960 TTTTCGATAGTGTCAGACGCTTCCACTTCGAGCGTGATTGTCTTGCCGGTCAACGTTTTC 245019 Query 94994 ACAAAGATCTGCAT 95007 || ||||||||||| Sbjct 245020 ACGAAGATCTGCAT 245033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||||||||| | ||| |||||||| ||||| || || || || | || || ||||| | Sbjct 245847 CAAAGATTAAACGTTGTTGATCTGGCGGAATGCCCTCCTTATCCTGGATCTTCGCCTTAA 245906 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || ||| ||||| | ||||| || | || ||||| || || || | ||||| Sbjct 245907 CGTTCTCGATCGTGTCGGATGCCTCGACCTCCAGGGTAATGGTCTTGCCTGTTAAAGTTT 245966 Query 94992 TCACAAAGATCTGCAT 95007 |||||||||||||||| Sbjct 245967 TCACAAAGATCTGCAT 245982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448113508575600