Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4681 100 6e-16
seq715 100 6e-16
seq575 100 6e-16
seq25738 98.7 2e-15
seq692 95.1 2e-14
seq2855 89.7 1e-12
seq7229 86.0 1e-11
>seq4681
Length=14152
Score = 100 bits (110), Expect = 6e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 13552 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 13611
Query 142564 CCCACATCGGGCAGA 142578
||| |||||||| ||
Sbjct 13612 CCCGCATCGGGCTGA 13626
>seq715
Length=83168
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||
Sbjct 73568 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 73627
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 73628 CCCCGCATCGGGC 73640
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||
Sbjct 73848 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 73907
Query 142563 CCCCACATCGGGC 142575
|||| ||||||||
Sbjct 73908 CCCCGCATCGGGC 73920
>seq575
Length=96907
Score = 100 bits (110), Expect = 6e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 3611 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 3552
Query 142564 CCCACATCGGGCAGA 142578
||| |||||||| ||
Sbjct 3551 CCCGCATCGGGCTGA 3537
>seq25738
Length=721
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 293 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 352
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 353 CCCGCATCGGGC 364
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 476 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 535
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 536 CCCGCATCGGGC 547
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||| ||||||| | |||| ||||||||||
Sbjct 110 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTTTTAATCTGGCTGTCGCGGGTTCGAGC 169
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 170 CCCGCATCGGGC 181
>seq692
Length=85198
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 22573 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 22632
Query 142564 CCCACATCGGGC 142575
||| ||||| ||
Sbjct 22633 CCCGCATCGTGC 22644
>seq2855
Length=25829
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||| |||||||||| | ||||||||||||| | |||| ||||||||||
Sbjct 25617 GCCCGGTTAGCTCGCTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 25558
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 25557 CCCGCATCGGGC 25546
Score = 89.7 bits (98), Expect = 1e-12
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 142509 GTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568
|||||||||||||||||||| | ||||||||||||| | |||| ||||||||||||| |
Sbjct 25795 GTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGCCCCGC 25736
Query 142569 ATCGGGC 142575
|||||||
Sbjct 25735 ATCGGGC 25729
>seq7229
Length=6708
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | | ||||||| ||| | |||| ||||||||||
Sbjct 6125 GCCCGGTTAGCTCAGTCGGTAGAGCACCAAACTCTTAGTCTGGATGTCGCGGGTTCGAGC 6066
Query 142564 CCCACATCGGGC 142575
||| | ||||||
Sbjct 6065 CCCGCGTCGGGC 6054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027419205968110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |