Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq108 89.7 5e-13 >seq108 Length=252163 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 |||||| |||| | ||||||||||| |||||||| || || || ||| |||||| | Sbjct 244894 CCAGCGAAGATTAGGCGCTGCTGATCAGGAGGTATCCCTTCTTTATCCTGGATTTTTGCC 244953 Query 127034 TTGAGTTGTTCGACGGTGTCCGTACTC-TCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 |||| | ||||| ||||| | || | || ||||||| || | || |||||||||| Sbjct 244954 TTGACGTTTTCGATAGTGTCAG-ACGCTTCCACTTCGAGCGTGATTGTCTTGCCGGTCAA 245012 Query 127093 AGTTTTTACAAAAATCTGCAT 127113 ||||| || || |||||||| Sbjct 245013 CGTTTTCACGAAGATCTGCAT 245033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475312323370400