Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq108 89.7 5e-13
>seq108
Length=252163
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/141 (75%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033
|||||| |||| | ||||||||||| |||||||| || || || ||| |||||| |
Sbjct 244894 CCAGCGAAGATTAGGCGCTGCTGATCAGGAGGTATCCCTTCTTTATCCTGGATTTTTGCC 244953
Query 127034 TTGAGTTGTTCGACGGTGTCCGTACTC-TCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092
|||| | ||||| ||||| | || | || ||||||| || | || ||||||||||
Sbjct 244954 TTGACGTTTTCGATAGTGTCAG-ACGCTTCCACTTCGAGCGTGATTGTCTTGCCGGTCAA 245012
Query 127093 AGTTTTTACAAAAATCTGCAT 127113
||||| || || ||||||||
Sbjct 245013 CGTTTTCACGAAGATCTGCAT 245033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475312323370400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |