Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq108 105 2e-17
seq1742 86.0 1e-11
>seq108
Length=252163
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||||||||| |||||||| |||| ||| ||||| | || ||
Sbjct 244258 CGAAGACGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTT 244317
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || ||||| || || || || |||||||| |||||||| || || || ||
Sbjct 244318 CGGCCGTCCTCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGTATACCC 244377
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||||| |||| || || | | || || |||||
Sbjct 244378 TCCTTATCTTGAATCTTGGCTTTCACATTCTCGATAGTATCGGACGCCTCCACCTCCAAA 244437
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || ||||| ||||||||
Sbjct 244438 GTAATTGTCTTGCCTGTCAGCGTCTTCACGAAAATTTG 244475
>seq1742
Length=41667
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549
|||||||| || ||||| |||||||| || ||| || ||| |||||||| || |
Sbjct 31293 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31352
Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609
|| || |||| ||||| | | ||| || || | |||||||| || || ||||||
Sbjct 31353 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31412
Query 199610 GTTTTCACAAAAATTTG 199626
|| ||||||||||||||
Sbjct 31413 GTCTTCACAAAAATTTG 31429
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549
|||||||| || ||||| |||||||| || ||| || ||| |||||||| || |
Sbjct 31597 CCGGCGAATATAAGACGTTGCTGGTCGGGTGGAATACCCTCTTTGTCCTGAATTTTCGCC 31656
Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609
|| || |||| ||||| | | ||| || || | |||||||| || || ||||||
Sbjct 31657 TTTACATTCTCGATCGTGTCCGACGCTTCCACCTCAAGGGTGATCGTTTTTCCTGTGAGA 31716
Query 199610 GTTTTCACAAAAATTTG 199626
|| ||||||||||||||
Sbjct 31717 GTCTTCACAAAAATTTG 31733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178442622574570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |