Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq108 91.5 2e-13 seq560 86.0 7e-12 >seq108 Length=252163 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || |||| ||||| ||||| ||| |||||||| |||||||| || ||| Sbjct 245453 CCTCCTCTCAATCGCAGCACCAAATGCAGCGTAGATTCCTTTTGTATATTGTAATCTGAT 245512 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATAT 46464 |||||||| |||| || |||||||| || || ||||| Sbjct 245513 AGAGTGCGACCGTCTTCAAGCTGCTTACCTGCAAATAT 245550 >seq560 Length=97729 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| |||| ||||| | || || |||| ||| |||||| ||||||||||||||||| Sbjct 87011 GCCGCCTCGCAAACGAAGAACGAGGTGCAGCGTAGACTCCTTCTGGATATTGTAGTCGGA 87070 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCC 46455 |||||||| ||||| ||||| |||||||| Sbjct 87071 GAGAGTGCGGTCGTCCTCGAGTTGCTTGCC 87100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565014353629200