Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq108 102 8e-17 seq9998 84.2 2e-11 seq6022 84.2 2e-11 >seq108 Length=252163 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || || || | || || ||||| || Sbjct 244478 ATGCAAATTTTCGTGAAGACGCTGACAGGCAAGACAATTACTTTGGAGGTGGAGGCGTCC 244419 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | |||| || || | || || ||||| || || |||| || Sbjct 244418 GATACTATCGAGAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATACCGCCCGATCAG 244359 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||||||||||| ||||| |||| || ||||| ||||| ||| Sbjct 244358 CAGCGACTCATCTTTGCGGGCAAACAACTGGAGGACGGCCGAACCCTGTCGGACTATAAC 244299 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || | ||||| ||| Sbjct 244298 ATCCAGAAGGAGTCCACTCTCCACCTCGTGCTTCGT 244263 >seq9998 Length=2827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || || ||||| || || |||||| || || || ||||||||||| || || | Sbjct 195 CCTCATCTCTTGAAATAAGCTCATTGCTGTGCGTTAATCCAGGCATGAGGCCACGCTTCT 254 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015 ||||||||||||| || || || || |||||||| |||| Sbjct 255 TGAGCCAAAATATCGCCGCAAAGCTTCCCGAAAAAAAGA 293 >seq6022 Length=9468 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || || ||||| || || ||||| ||||| || ||||||||||| || || | Sbjct 7294 CCTCATCTCTTGAAATAAGCTCATTGCTATGCGTCAATCCAGGCATGAGGCCACGCTTCT 7353 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015 ||||||||||||| || || || || |||||||| |||| Sbjct 7354 TGAGCCAAAATATCGCCGCAAAGCTTCCCGAAAAAAAGA 7392 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243 |||||||||| |||||||| | |||||| || ||||||||| || || ||| | || | Sbjct 8919 TCGAATACATCTCCGAGTGAATGTTCTCTATCATGATTTGAAAACCATAGAAGAAACGTG 8978 Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281 |||| ||||| ||||| || ||||||||||| ||| Sbjct 8979 CCTCAGGAACCTGTACTTCCTGGGCGAAACGCTCCACC 9016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499974544006400