Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq579 107 8e-18
seq5916 91.5 6e-13
seq4121 91.5 6e-13
seq2784 91.5 6e-13
seq108 91.5 6e-13
seq30636 87.8 7e-12
seq3704 86.0 2e-11
seq467 86.0 2e-11
seq271 86.0 2e-11
>seq579
Length=95530
Score = 107 bits (118), Expect = 8e-18
Identities = 172/247 (70%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265
||||||| | | |||||||||| | ||| |||| || || || ||||| |||
Sbjct 39339 TTCAAGTGGAGTTCAAAGGTGAAAAACGAGTTTTCACTCCCGAGGAGATCTCATCGATGA 39280
Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325
||||| |||||||||||||| || ||| | || ||| |||||| || || |
Sbjct 39279 TTCTTGTGAAAATGAAAGAAACCGCCGAAGCGTTCATCGGTCGTCCAGTGCGAGAAGCCG 39220
Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385
| || || || || || ||||| || ||| || || ||||| || || || || ||
Sbjct 39219 TCATCACAGTGCCGGCATATTTTAACGATAGCCAGCGTCAAGCCACGAAGGACGCTGGCA 39160
Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445
||||| || || ||||| | ||||| || || ||||| ||||| ||||| || || |
Sbjct 39159 CGATTGCCGGCTTGAATGTGTTGCGAATCATCAACGAACCCACAGCCGCTGCACTCGCCT 39100
Query 451446 ATGGACT 451452
|||| ||
Sbjct 39099 ATGGTCT 39093
>seq5916
Length=9773
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 78 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 135
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 136 GTCCCACAGAAGGC 149
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 403 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 460
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 461 GTCCCACAGAAGGC 474
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 728 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 785
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 786 GTCCCACAGAAGGC 799
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 78 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 135
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 136 GTCCCACAGAAGGC 149
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 78 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 135
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 136 GTCCCACAGAAGGC 149
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 403 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 460
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 461 GTCCCACAGAAGGC 474
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 403 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 460
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 461 GTCCCACAGAAGGC 474
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 728 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 785
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 786 GTCCCACAGAAGGC 799
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 728 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 785
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 786 GTCCCACAGAAGGC 799
>seq4121
Length=16675
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8043 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 7986
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 7985 GTCCCACAGAAGGC 7972
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8383 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 8326
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 8325 GTCCCACAGAAGGC 8312
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 10364 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 10307
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 10306 GTCCCACAGAAGGC 10293
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| |||||||||||||
Sbjct 7724 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGG 7667
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 7666 GTCCCACAGAAGGC 7653
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8043 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 7986
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 7985 GTCCCACAGAAGGC 7972
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8043 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 7986
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 7985 GTCCCACAGAAGGC 7972
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8383 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 8326
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 8325 GTCCCACAGAAGGC 8312
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 8383 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 8326
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 8325 GTCCCACAGAAGGC 8312
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 10364 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 10307
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 10306 GTCCCACAGAAGGC 10293
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 10364 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 10307
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 10306 GTCCCACAGAAGGC 10293
>seq2784
Length=26471
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 244 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 187
Query 509566 GTCCCACATAAGGC 509579
|||||||| |||||
Sbjct 186 GTCCCACAGAAGGC 173
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 244 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 187
Query 511715 ATCCCACATAAGGC 511728
||||||| |||||
Sbjct 186 GTCCCACAGAAGGC 173
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 244 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 187
Query 510801 ATCCCACATAAGGC 510814
||||||| |||||
Sbjct 186 GTCCCACAGAAGGC 173
>seq108
Length=252163
Score = 91.5 bits (100), Expect = 6e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| |||| |||||||| || ||||| || || ||| | ||
Sbjct 247401 ATGCAGATTTTCGTGAAAACGTTGACCGGTAAAACCATCACTCTCGAGGTGGAAGCGTCG 247342
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| || || || || ||||||||||| || || |||||
Sbjct 247341 GATACGATTGAAAATGTCAAAGCTAAGATCCAGGACAAGGAAGGAATCCCACCAGATCAG 247282
Query 391170 CAACGTTTAATTTTCTCAGGGAA 391192
|||||| | || ||| | || ||
Sbjct 247281 CAACGTCTTATCTTCGCCGGTAA 247259
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || |||||| | || || || | ||
Sbjct 244478 ATGCAAATTTTCGTGAAGACGCTGACAGGCAAGACAATTACTTTGGAGGTGGAGGCGTCC 244419
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | ||| || |||||||||||||| || || || || |||||
Sbjct 244418 GATACTATCGAGAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATACCGCCCGATCAG 244359
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || || | || |||||||| || || || |||| || |||| |||||
Sbjct 244358 CAGCGACTCATCTTTGCGGGCAAACAACTGGAGGACGGCCGAACCCTGTCGGACTATAAC 244299
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 244298 ATCCAGAAGGAGTCCACTCTCCAC 244275
>seq30636
Length=528
Score = 87.8 bits (96), Expect = 7e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 113 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 170
Query 509566 GTCCCACATAAGGCTCC 509582
|||||||| | ||| ||
Sbjct 171 GTCCCACAGAGGGCGCC 187
>seq3704
Length=19141
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 11109 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 11166
Query 509566 GTCCCACATAAGGC 509579
|||||||| | |||
Sbjct 11167 GTCCCACAGAGGGC 11180
>seq467
Length=112660
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 98241 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 98298
Query 509566 GTCCCACATAAGGC 509579
|||||||| | |||
Sbjct 98299 GTCCCACAGAGGGC 98312
>seq271
Length=154885
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| |||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 76301 GCCTTCTTAGCTCAGTCGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 76244
Query 509566 GTCCCACATAAGGC 509579
|||||||| | |||
Sbjct 76243 GTCCCACAGAGGGC 76230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974915696484680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |