Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq108 95.1 8e-15
seq560 82.4 5e-11
>seq108
Length=252163
Score = 95.1 bits (104), Expect = 8e-15
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| |||||||||||||| ||| |||| | || ||||| ||||| || |||||
Sbjct 244288 TCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCGTCCTCCAGTTGTTTGCCCGCAAAG 244347
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| ||||| || |||| | |||||||| || |||||| ||| || ||
Sbjct 244348 ATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTATCTTGAATCTTGGCTTTCAC--AT 244405
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | || ||||| || || | || || || || || || || |||||||
Sbjct 244406 TCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATTGTCTTGCCTGTCAGCGTCTTCA 244465
Query 34969 CAAAGATCTGCAT 34981
| || || |||||
Sbjct 244466 CGAAAATTTGCAT 244478
>seq560
Length=97729
Score = 82.4 bits (90), Expect = 5e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 34842 CCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT 34901
|||||||| || || ||||||||||| |||| | ||||||||||| ||||||| |
Sbjct 88804 CCGGCAAAGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCACT 88863
Query 34902 TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGA 34961
|| ||| | | || | || | ||| || || | ||| || || || ||||| ||
Sbjct 88864 TTAACGTTTTCGATGGTGTCGGAAGGCTCGACCTCAAGGGTGATCGTCTTCCCCGTTAGC 88923
Query 34962 GTCTTCACAAAGATCTGCAT 34981
||||| ||||||| ||||||
Sbjct 88924 GTCTTGACAAAGAGCTGCAT 88943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324508140272880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |