Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq299 343 2e-89
seq579 250 3e-61
seq108 167 3e-36
seq726 134 2e-26
seq1742 125 9e-24
seq6515 122 1e-22
seq1976 122 1e-22
seq560 111 2e-19
seq51 93.3 6e-14
>seq299
Length=146952
Score = 343 bits (380), Expect = 2e-89
Identities = 950/1434 (66%), Gaps = 48/1434 (3%)
Strand=Plus/Minus
Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391
||||| || || | || |||| | || |||||||| | ||||||||||| |||
Sbjct 19574 TGTGTCGGCGTCTATCAGAATGGCCACGTCGAGATTATTGCCAATGACCAAGGCAACAAA 19515
Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451
||||| || || | ||| || || || |||| |||||||| |||||||||| || ||
Sbjct 19514 ACAACACCTTCTTTCGTCGCGTTCACCGATACGGAACGTCTTATTGGAGATGCGGCTAAG 19455
Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511
| || ||| || ||| ||||| |||| ||||||||| | ||||| || |
Sbjct 19454 GAGCAAGTGGCTCGTAATCCTGAGAATACGATCTTCGACGCGAAGAGGCTTATCGGCAGG 19395
Query 195512 AAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCC 195571
||||| || || || ||| | ||||| ||||| | | |||| |||||
Sbjct 19394 AAGTTCGATGACCCTAAGGTGCAACAGGATATGCGCAACTGGCCCTTCAAAGTGGTTCCG 19335
Query 195572 GGT-GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGC 195630
||||| ||||| | | || ||||| | || ||||| | || |
Sbjct 19334 AAAAGTGGC----AAGCCAGCCGTCGAGGTAGAATTCAAAGGCGAGAAAAGGGTCTTCAC 19279
Query 195631 TCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGA-ATCTTTCA 195689
|| ||||| || || || ||||| | | |||||||| |||||||| || | || ||
Sbjct 19278 GCCTGAAGAGATCTCTTCAATGGTTCTCGTCAAGATGAAAGAGACTGCAGAGAGCTATCT 19219
Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749
||| | | || || ||||| | || || || || || |||| || ||||
Sbjct 19218 TGGCCATC-CGGTTGCCGAGGCAGTAATCACAGTCCCGGCCTATTTCAACGACAGTCAAC 19160
Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809
| ||||| || ||||| || | ||||| ||||| || || ||||| || || |
Sbjct 19159 GCCAGGCCACGAAGGATGCGTCCATCATTGCAGGTCTGAAGCCCCTGAGAATCATAAACG 19100
Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA-CAAG--GACGAAGATAAAA 195866
| ||||| || || || | ||||| ||||| |||||||| | | |||||| || |
Sbjct 19099 AGCCAACTGCAGCCGCGCTCGCTTACGGTCTTGACAAGAAGCTATCTGACGAA---AAGA 19043
Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926
| || | || |||||||| ||||| || || || || ||||| |||| | ||| | |
Sbjct 19042 ACGTGCTTATATTTGATCTGGGTGGAGGGACTTTCGACGTCTCCATTCTGACTATCGCCG 18983
Query 195927 GTGGTA---TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATT 195983
|| | |||||||| ||| | || ||||| ||||| ||||| ||||| |||||||
Sbjct 18982 AGGGATCCTTGTTCGAAGTGAAGTCCACAGCTGGCGATACGCATCTGGGTGGCGAAGATT 18923
Query 195984 TCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAA--TAAGAAAGA 196041
| |||| ||| | | ||| || | || || ||| | |||| || | |
Sbjct 18922 TTGATGACCGTATGGTTAATCACTTTGCAGAGGAATTCAG----AAGACGTTACGGCAAG 18867
Query 196042 TATTTCTGGAAA--TCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099
| || |||| | | || || |||||||| | || || || |||||||| |||||
Sbjct 18866 GACTTGAAGAAAAATGCGAGAGCACTTCGTCGTTTGAGAACAGCGTGTGAACGCGCCAAG 18807
Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTT--GACGGAA 196157
| || ||||| | || ||| |||| ||||| || || | | || || ||||
Sbjct 18806 AGGACACTCTCCAGCTCTGCGCAAGCAATTGTTGAAATCGA--CAGTCTTCACGAAGGAA 18749
Query 196158 TTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA 196217
| |||||| || | || || || ||||| || ||||| | ||||||| |||||
Sbjct 18748 TCGACTTCCATGGGAAGATCACTCGAGCACGATTCGAAGAACTCTGCTCTGATCTGTTTC 18689
Query 196218 GGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGG 196277
|||| | || ||||| || || | ||||||| || || || ||| ||||
Sbjct 18688 GGAAAACGCTTGAGCCTGTCGAGCAGGCCATTCGTGATGCTCGCATCGACAAG---AAGG 18632
Query 196278 ---TTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGC 196334
| ||||||||||| ||||| || || || || | || |||||| | || || | |
Sbjct 18631 CCATCGATGAAATTGTGCTTGTTGGTGGCTCTACTAGAATACCGAAGGTGCAGAAGCTAC 18572
Query 196335 TTTCTAGC---TTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAG 196391
| ||| ||||||||| ||| | | || ||||||| || ||||| ||||
Sbjct 18571 TC---AGCGAATTCTTCAATGGCAAACAGCTGAATCTTTCGATCAATCCTGATGAGGCAG 18515
Query 196392 TTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCC 196451
||||||| ||||| || ||||| ||||| | || |||||| | |||| | |||
Sbjct 18514 TTGCTTACGGTGCCGCAGTTCAAGCTGCCGTGCTGAGCGGTGTTCAAGATAAGACCGTGA 18455
Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTG 196511
| || |||| | ||||||| | || |||| |||| ||||||| || ||||||
Sbjct 18454 AGGACGTTCTATTGGTTGATGTCACTCCACTATCATTGGGAATTGAAACGGCTGGTGGTA 18395
Query 196512 TTATGACTAAAATTA-TTGATAGGAACACAACTATTCCGACTAAGAAGGA--ACAAGTCT 196568
| ||||| ||||||| | || ||||| || |||||| |||| ||| | |||| |
Sbjct 18394 TGATGAC-AAAATTAGTGGAAAGGAATACTCGTATTCCAACTA--AAGCAACACAAACGT 18338
Query 196569 TTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCT 196628
| | || |||||||| || || || || || |||||||| | ||| || ||||| |
Sbjct 18337 TCACCACCTATTCCGACAACCAGCCTGGCGTCAGCATTCAAGTTTTTGAGGGCGAACG-T 18279
Query 196629 CCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCA 196687
| || | ||||| || | || | |||| ||||| | | ||||||||| | |||
Sbjct 18278 GCGATGACGAAGGACAATAACCTGTTGGGAAAGTTCGACCTCAGTGGGATTCCACCCGCA 18219
Query 196688 CCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATT 196741
|| | || ||||| |||||| | || |||||| | |||||||| || |||
Sbjct 18218 CCACGTGGAGTTCCTCAGATTGAGGTCACTTTCGATCTGGACGCAAACGGCATT 18165
>seq579
Length=95530
Score = 250 bits (276), Expect = 3e-61
Identities = 854/1315 (65%), Gaps = 26/1315 (2%)
Strand=Plus/Minus
Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357
|||| |||| ||||| ||||| ||||||||| |||||||| |||| ||| ||| |
Sbjct 39632 AGCTGTTGGAATCGACTTAGGTACTACTTACAGTTGTGTTGGAGTATTCCAATATGGTAA 39573
Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417
|| || || || | ||||| ||||| || ||||| || || || || || |||||
Sbjct 39572 GGTGGAAATAATTGCCAATGATCAAGGCAATAAGACAACACCGTCTTATGTGGCATTTAC 39513
Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477
|| | || ||| | | || || | || | |||| ||| || || ||
Sbjct 39512 TGAAAGCGAGCGTTTGATCGGTAATCCGGCTTACGATCAAGTGGCTCGAAATCCGGAAAA 39453
Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537
||| | || || || ||||| | || || ||||| | || ||||| || ||
Sbjct 39452 TACAATATTCGATGCAAAGCGCATCATAGGCCGCAAAATGGACGACCCTAAAGTACAGGA 39393
Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGATTA 195596
||||| | ||| | | || | ||| || | ||| || || | || | |
Sbjct 39392 AGATATGCGTCATTGGCCATTCAAAATCGTTTCCAAAGGTGG--GA-AACCGGCTGTTCA 39336
Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656
| || || || | ||||| || | || ||||||| || || || || ||| |
Sbjct 39335 A-GTGGAGTTCAAAGGTGAAAAACGAGTTTTCACTCCCGAGGAGATCTCATCGATGATTC 39277
Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716
| | || ||||| || || || ||| | ||||| ||| | ||| ||| || ||
Sbjct 39276 TTGTGAAAATGAAAGAAACCGCCGAAGCGTTCATCGGTCGTCCAGTGCGAGAAGCCGTCA 39217
Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776
| || || || || || || | ||| || || || || || |||||||||| | |
Sbjct 39216 TCACAGTGCCGGCATATTTTAACGATAGCCAGCGTCAAGCCACGAAGGACGCTGGCACGA 39157
Query 195777 TTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835
|||| || | || ||| || |||| ||||| ||||| ||||| |||||| | || |||
Sbjct 39156 TTGCCGGCTTGAA-TGTGTTGCGAATCATCAACGAACCCACAGCCGCTGCACTCGCCTAT 39098
Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
||||| |||||||| | | ||| |||| || | |||||||| | || ||||||
Sbjct 39097 GGTCTTGACAAGAAGCTGCGTGGGGATCAAAACGTGCTCATCTTTGACTTAGGCGGTGGT 39038
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG---TATATTCGAAGTAAAGGCTACT 195952
|| || || || || ||||| |||| || || | | || ||||| ||| | ||
Sbjct 39037 ACCTTCGACGTTTCGATTCTCTCGATTGCAGAAGGCTCTTTGTTTGAAGTGAAGTCGACA 38978
Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC- 196011
||||||||||| ||||| ||||| || |||||||||| ||| | | |||| ||
Sbjct 38977 GCTGGTGATACACATCTGGGTGGAGAGGATTTCGATGATCGTATGGT--AAAATTTTTCA 38920
Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070
||||||||| || || | | || ||||| || ||| |||| | | | | |
Sbjct 38919 TTGATGAGTTTAAGCGTAAAACTGGCAAGGATATATCACGAAGTCCTCGATCATTGAGAC 38860
Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC---TTCTACGGCTCAAACAA 196127
| ||| | || || || || ||||| ||||| || | || ||| |||| | |
Sbjct 38859 GTCTTCGTACGGCTTGCGAGCGTGCTAAACGTACCTTGTCCAGTTCGACGG---AGGCCG 38803
Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187
| || || | ||| | | || ||| | ||| | | | | ||| | || ||||
Sbjct 38802 TCGTCGAAGTGGATAGTCTCTACGAAGGAGTGGACATGAACTCGAAAATTTCACGGGCAC 38743
Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247
| || || ||| || ||| | || ||||| | || ||||||| | || |
Sbjct 38742 GCTTCGAGGAGCTATGTATCGATCTTTTCCGGAAGACCCTCGAGCCTGTTG--CGAGGGC 38685
Query 196248 --TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305
| || || | |||||||| | |||||||| | | || || || || ||
Sbjct 38684 GATCACCGATGCTCACTTGGATAAGCGCCAAATTGATGAAGTGATTCTGGTTGGTGGTTC 38625
Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365
|| || ||||| || | ||| | ||||| || |||||||| |||||||| ||
Sbjct 38624 CACGCGAATTCCCAAAGTGCAAAAAATGCTAGCTGAGTTCTTCAACGGCAAAGATTTGAA 38565
Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425
| |||| || || ||||| || || || ||||| ||||||||||| || || |||||
Sbjct 38564 TCATTCGATAAATCCCGATGAGGCGGTCGCATATGGGGCGGCCGTTCAAGCCGCAATTCT 38505
Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485
|| |||||| | |||| | || | ||| | |||| ||||||| |||||| | ||
Sbjct 38504 TTCTGGTGTTCAGGATAAAACTGTGAAGGATGTATTGCTTGTTGATGTGGCACCCCTTTC 38445
Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545
|| || ||||||| || || ||||||||||| || | |||||| | || | ||
Sbjct 38444 ACTCGGCATTGAAACGGCCGGCGGTGTTATGACGAATCTCATTGATCGAAATTCGCGAAT 38385
Query 196546 TCCGACTAAGAAGGAACAAG-TCTTTTCAACGTATTCCGATAATCAACCAGGTGT 196599
||||| || | || ||| | || |||| | || |||||||||| ||||||
Sbjct 38384 ACCGACCAA-AGCGACGAAGATGTTCACAACATTCTCGGATAATCAACAAGGTGT 38331
>seq108
Length=252163
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || ||||| || || || || || || || || | ||||| ||| ||||
Sbjct 244478 ATGCAAATTTTCGTGAAGACGCTGACAGGCAAGACAATTACTTTGGAGGTGGAGGCGTCC 244419
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| || | ||||||||||||||||||||||| || || || |||||||||
Sbjct 244418 GATACTATCGAGAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATACCGCCCGATCAG 244359
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||||| || ||||| || ||||| || || || || || ||||| | || || |||
Sbjct 244358 CAGCGACTCATCTTTGCGGGCAAACAACTGGAGGACGGCCGAACCCTGTCGGACTATAAC 244299
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || |||||||| ||||| ||||| || || | ||||| || ||
Sbjct 244298 ATCCAGAAGGAGTCCACTCTCCACCTCGTGCTTCGTCTTCGCGGAGG 244252
Score = 150 bits (166), Expect = 2e-31
Identities = 119/143 (83%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
|||||||||| |||||||| || | ||||| ||||||||||| || ||||| || |||
Sbjct 246868 GTATGCAAATATTTGTGAAGACATTGACTGGCAAAACTATCACTCTGGAGGTGGAAGCGT 246809
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||||||||| ||| |||| || ||||| ||||| |||||||| |||||||| ||||
Sbjct 246808 CGGACACAATCGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGGATTCCACCAGATC 246749
Query 171980 AGCAACGACTTATTTTTGCTGGT 172002
|||| || ||||| || ||||||
Sbjct 246748 AGCAGCGCCTTATCTTCGCTGGT 246726
Score = 127 bits (140), Expect = 3e-24
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 171853 ACTAGTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTT 171912
|||| || ||||||||||| |||||||| |||||||| || || ||||| ||||| ||
Sbjct 248273 ACTATAAGCATGCAAATCTTCGTGAAAACTCTTACTGGCAAGACGATCACTCTCGAAGTG 248214
Query 171913 GAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCA 171972
||| ||||||| ||||| || ||| |||| |||||||| || || || || ||||| ||
Sbjct 248213 GAGGCGTCAGATACAATTGAGAACGTCAAGGCCAAGATACAGGACAAAGAGGGCATCCCG 248154
Query 171973 CCCGATCAGCAACGACTTATTTTTGCTGGT 172002
|| || || ||||| || || || || |||
Sbjct 248153 CCTGACCAACAACGTCTCATCTTCGCCGGT 248124
Score = 125 bits (138), Expect = 9e-24
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| |||||||||||||| | || || || || || ||||| ||||| ||| | |
Sbjct 245984 GTATGCAGATCTTTGTGAAAACTTTAACAGGCAAGACCATTACCCTGGAGGTCGAGGCAT 245925
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| | || || ||||| || |||||||| |||||||| || ||||
Sbjct 245924 CCGACACGATCGAGAACGTTAAGGCGAAGATCCAGGATAAGGAGGGCATTCCGCCAGATC 245865
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
| ||||| | || ||||||||||
Sbjct 245864 AACAACGTTTAATCTTTGCTGGTA 245841
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || |||||||| | || || ||||| ||||| |||||||| || ||||
Sbjct 247401 ATGCAGATTTTCGTGAAAACGTTGACCGGTAAAACCATCACTCTCGAGGTGGAAGCGTCG 247342
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || ||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct 247341 GATACGATTGAAAATGTCAAAGCTAAGATCCAGGACAAGGAAGGAATCCCACCAGATCAG 247282
Query 171982 CAACGACTTATTTTTGCTGGTAA 172004
||||| ||||| || || |||||
Sbjct 247281 CAACGTCTTATCTTCGCCGGTAA 247259
Score = 113 bits (124), Expect = 6e-20
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| || || ||||| || || ||||| ||||| ||||| || || | |
Sbjct 246370 GTATGCAGATCTTCGTCAAGACCCTCACCGGTAAAACCATCACACTCGAAGTAGAAGCAT 246311
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| || |||||||| || | || || |||||||| || || || ||||| || || ||||
Sbjct 246310 CCGATACAATCGAAAATGTGAAGGCGAAGATTCAGGACAAAGAGGGCATCCCTCCGGATC 246251
Query 171980 AGCAACGACTTATTTTTGCTGGTAA 172004
| || ||||| || |||||||||||
Sbjct 246250 AACAGCGACTCATCTTTGCTGGTAA 246226
Score = 95.1 bits (104), Expect = 2e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 172000 GGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACT 172059
|||||||||||||| |||||||| || || | ||||| ||| | |||||||||||||||
Sbjct 245123 GGTAAACAGCTTGAGGATGGACGCACGCTTTCCGATTATAACATCCAAAAGGAGTCTACT 245064
Query 172060 CTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| |||||||| || | ||||| ||||||
Sbjct 245063 CTTCACCTTGTCCTTCGCCTTCGTGGTGGT 245034
>seq726
Length=81827
Score = 134 bits (148), Expect = 2e-26
Identities = 164/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
||||| || || || | ||| | ||||| ||| |||||||||||||| ||| || ||
Sbjct 9013 TTTGCACCGGAGGAGGTATCGGCAATGGTTTTGGGTAAGATGAAGGAGATTGCTGAGTCC 8954
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| | || || ||||| | || || || || || ||||| || |||| ||| |
Sbjct 8953 TATCTCGGCAAGGAGGTGAAGCACGCTGTCGTTACCGTGCCTGCCTATTTCAACGATGCT 8894
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
|| |||||||| |||||||| || | | ||||||| || || || | || |||| |||
Sbjct 8893 CAGCGACAGGCCACAAAGGATGCGGGTACTATTGCAGGCCTCAATGTTGTTCGAATCATC 8834
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| ||||| || || ||||| ||||| ||||| |||||||||||
Sbjct 8833 AACGAACCGACCGCAGCTGCTATTGCCTATGGACTGGACAAGAA 8790
>seq1742
Length=41667
Score = 125 bits (138), Expect = 9e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
||||||||| |||||||| || || || |||||||| |||||||| ||||| || ||||
Sbjct 31433 TATGCAAATTTTTGTGAAGACTCTCACAGGAAAAACGATCACCCTTGAGGTGGAAGCGTC 31374
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
||||| ||||| || | || || || ||||| || || || || ||||||||||| ||
Sbjct 31373 GGACACGATCGAGAATGTAAAGGCGAAAATTCAGGACAAAGAGGGTATTCCACCCGACCA 31314
Query 171981 GCAACGACTTATTTTTGCTGGT 172002
|||||| ||||| || || |||
Sbjct 31313 GCAACGTCTTATATTCGCCGGT 31292
Score = 125 bits (138), Expect = 9e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
||||||||| |||||||| || || || |||||||| |||||||| ||||| || ||||
Sbjct 31737 TATGCAAATTTTTGTGAAGACTCTCACAGGAAAAACGATCACCCTTGAGGTGGAAGCGTC 31678
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
||||| ||||| || | || || || ||||| || || || || ||||||||||| ||
Sbjct 31677 GGACACGATCGAGAATGTAAAGGCGAAAATTCAGGACAAAGAGGGTATTCCACCCGACCA 31618
Query 171981 GCAACGACTTATTTTTGCTGGT 172002
|||||| ||||| || || |||
Sbjct 31617 GCAACGTCTTATATTCGCCGGT 31596
Score = 122 bits (134), Expect = 1e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
||||||||| |||||||| || || || |||||||| |||||||| ||||| || |||
Sbjct 22872 TATGCAAATTTTTGTGAAGACTCTCACAGGAAAAACGATCACCCTTGAGGTGGAAGCGTT 22931
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
||||| ||||| || | || || || ||||| || || || || ||||||||||| ||
Sbjct 22932 GGACACGATCGAGAATGTAAAGGCGAAAATTCAGGACAAAGAGGGTATTCCACCCGACCA 22991
Query 171981 GCAACGACTTATTTTTGCTGGT 172002
|||||| ||||| || || |||
Sbjct 22992 GCAACGTCTTATATTCGCCGGT 23013
>seq6515
Length=8246
Score = 122 bits (134), Expect = 1e-22
Identities = 194/273 (71%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663
|||| || |||||||| ||||| | | || | ||||| ||| | || || || | |||
Sbjct 7657 TTCAGGTGTATGAAGGTGAACG-TGCAATGACTAAGGACAACAACCTGCTGGGCAAGTTC 7599
Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723
|| | | || || ||| | ||||| | |||||||| ||||| | || |||||||
Sbjct 7598 GAGCTCTCTGGTATCCCACCAGCACCTCGGGGTGTTCCCCAGATCGAGGTCACCTTCGAT 7539
Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783
|| || || || || || | ||||| | ||| ||||||| | | |||||| | |||
Sbjct 7538 ATCGATGCCAACGGCATCTTGAACGTATCGGCTCAGGACAAATCGACCGGCAAA-CAGAA 7480
Query 196784 -AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842
|||||| || |||||||||||||| || | || ||||| || || || ||||||||
Sbjct 7479 CAAGATTACAATCACCAATGACAAGGGACGTTTGTCGAAGGACGAGATCGATCGTATGGT 7420
Query 196843 TCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875
|| || || |||| |||| | ||| |||||
Sbjct 7419 GCAGGAAGCCGAAAGATACAAAGCAGACGACGA 7387
>seq1976
Length=37302
Score = 122 bits (134), Expect = 1e-22
Identities = 194/273 (71%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663
|||| || |||||||| ||||| | | || | ||||| ||| | || || || | |||
Sbjct 9332 TTCAGGTGTATGAAGGTGAACG-TGCAATGACTAAGGACAACAACCTGCTGGGCAAGTTC 9274
Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723
|| | | || || ||| | ||||| | |||||||| ||||| | || |||||||
Sbjct 9273 GAGCTCTCTGGTATCCCACCAGCACCTCGGGGTGTTCCCCAGATCGAGGTCACCTTCGAT 9214
Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783
|| || || || || || | ||||| | ||| ||||||| | | |||||| | |||
Sbjct 9213 ATCGATGCCAACGGCATCTTGAACGTATCGGCTCAGGACAAATCGACCGGCAAA-CAGAA 9155
Query 196784 -AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842
|||||| || |||||||||||||| || | || ||||| || || || ||||||||
Sbjct 9154 CAAGATTACAATCACCAATGACAAGGGACGTTTGTCGAAGGACGAGATCGATCGTATGGT 9095
Query 196843 TCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875
|| || || |||| |||| | ||| |||||
Sbjct 9094 GCAGGAAGCCGAAAGATACAAAGCAGACGACGA 9062
Score = 116 bits (128), Expect = 5e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
||||||| ||||| |||| || |||||||| ||||| || | || || || || || |
Sbjct 10975 TTGAGATCGATTCTCTGTTCGAGGGAATTGATTTCTACACGAACATCACTCGAGCTCGCT 10916
Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
|||| || || ||||| | || | | ||||| || || || | | |||||
Sbjct 10915 TTGAGGAATTGTGTGCTGATCTCTTCCGTTCGACGATGGATCCAGTAGAGAAGGCACTTC 10856
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
|||||||||||||||| || || || | |||| || || |||||||| || |||||||
Sbjct 10855 GTGACGCAAAGATGGACAAATCACAGATGCATGATATCGTACTTGTGGGTGGGTCAACCC 10796
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTT 196347
||||||| ||| | ||| | |||| || ||||||
Sbjct 10795 GTATTCCCAAGGTGCAAAAATTGCTATCAGACTTCTT 10759
Score = 113 bits (124), Expect = 6e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
||||||| ||||| |||| || |||||||| ||||| || | || || || || || |
Sbjct 12123 TTGAGATCGATTCTCTGTTCGAGGGAATTGATTTCTACACGAACATCACTCGAGCTCGCT 12064
Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
|||| || || ||||| | || | | ||||| || || || | | |||||
Sbjct 12063 TTGAGGAATTGTGTGCTGATCTCTTCCGTTCGACGATGGATCCAGTAGAGAAGGCACTTC 12004
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
|||||||||||||||| || || || | | || || || |||||||| || |||||||
Sbjct 12003 GTGACGCAAAGATGGACAAATCACAGATGCANGATATCGTACTTGTGGGTGGGTCAACCC 11944
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTT 196347
||||||| ||| | ||| | |||| || ||||||
Sbjct 11943 GTATTCCCAAGGTGCAAAAATTGCTATCAGACTTCTT 11907
>seq560
Length=97729
Score = 111 bits (122), Expect = 2e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| || ||||| || || ||||| || || || || || ||||| || ||||
Sbjct 88448 GTGGTATGCAGATATTTGTCAAGACGCTTACCGGCAAGACGATTACACTCGAAGTGGAGT 88389
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||||||||| || |||| || || || ||||| |||||||| || |||||||
Sbjct 88388 CATCGGACACAATCGAAAATGTCAAGGCGAAAATCCAAGACAAGGAAGGTATCCCACCCG 88329
Query 171977 ATCAGCAACGACTTATTTTTGCTGGT 172002
| || || || || || || || |||
Sbjct 88328 ACCAACAGCGTCTGATCTTCGCAGGT 88303
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || ||||| || ||||| ||||| | || | || || ||| | ||
Sbjct 87638 ATGCAAATCTTCGTCAAAACGCTCACTGGCAAAACGTTGACGTTGGAAGTCGAGCCCTCT 87579
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || | | | |||| || ||||||||||| ||||||||||| || ||||||||
Sbjct 87578 GATGCAGTGCAGCATGTCAAGGCGAAGATTCAAGACAAGGAAGGCATCCCGCCCGATCAA 87519
Query 171982 CAACGACTTATTTTTGCTGGTA 172003
|| ||||| || || || ||||
Sbjct 87518 CAGCGACTCATATTCGCAGGTA 87497
Score = 89.7 bits (98), Expect = 7e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 171854 CTAGTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTG 171913
|| || | ||||| || ||||| || || || || || || || || || ||||| || |
Sbjct 79804 CTTGTGGGATGCAGATATTTGTCAAGACGCTAACCGGCAAGACGATTACACTCGAAGTGG 79745
Query 171914 AGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCAC 171973
|||| || ||||||||||| || |||| || || || || || |||||||| || | |
Sbjct 79744 AGTCATCGGACACAATCGAAAATGTCAAGGCGAAAATCCAGGACAAGGAAGGTATCCGTC 79685
Query 171974 CCGATCAGCAACGACTTATTTTTGCTGGT 172002
|||| || || || || || || || |||
Sbjct 79684 CCGACCAACAGCGTCTGATCTTCGCAGGT 79656
>seq51
Length=344957
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| | |||||||| || || || || || || ||||| || ||| | ||
Sbjct 218271 ATGCAAATCTTCATCAAAACCCTAACCGGTAAGACAATAACACTCGAAGTCGAGGCTTCG 218212
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | || || |||||||| || ||||| || ||||| ||||| |||
Sbjct 218211 GATACTATTGAAAATGTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCCGACCAG 218152
Query 171982 CAACGACTTATTTTTGCTGGT 172002
|| || || || || || |||
Sbjct 218151 CAGCGTCTGATCTTCGCCGGT 218131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657601639791200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |