Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq108 109 1e-18 >seq108 Length=252163 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || || | || | ||| || || |||||||| || | |||| Sbjct 244264 CGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCG 244323 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || ||||| || | || ||| ||||| || ||||| || || ||| Sbjct 244324 TCCTCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTA 244383 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | ||| ||||||||||| | ||| || || | ||| || Sbjct 244384 TCTTGAATCTTGGCTTTCACATTCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATT 244443 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| ||||| || || || |||||||| Sbjct 244444 GTCTTGCCTGTCAGCGTCTTCACGAAAATTTGCAT 244478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899297799487200