Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24]
31,710 sequences; 316,975,410 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq108 98.7 6e-16
seq560 91.5 1e-13
>seq108
Length=252163
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||| ||||||||| |||||||||||||| ||| | || | ||
Sbjct 244267 AGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCGTCC 244326
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||||||| || || || ||||| ||||| ||||| || |||| | |||||||| ||
Sbjct 244327 TCCAGTTGTTTGCCCGCAAAGATGAGTCGCTGCTGATCGGGCGGTATACCCTCCTTATCT 244386
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||| || || || || | || ||||| || || | || || |
Sbjct 244387 TGAATCTTGGCTTTCAC--ATTCTCGATAGTATCGGACGCCTCCACCTCCAAAGTAATTG 244444
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || || ||||| || || || ||||||
Sbjct 244445 TCTTGCCTGTCAGCGTCTTCACGAAAATTTGCATG 244479
>seq560
Length=97729
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34838 CCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT 34897
||||| ||||| || ||||||||||| |||| | ||||||||||| | || || |
Sbjct 88804 CCGGCAAAGATGAGACGTTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCACT 88863
Query 34898 TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
|| ||| | | || | || | |||||| |||| ||| || ||||| ||||| ||
Sbjct 88864 TTAACGTTTTCGATGGTGTCGGAAGGCTCGACCTCAAGGGTGATCGTCTTCCCCGTTAGC 88923
Query 34958 GTCTTTACAAAGATCTGCATGATAG 34982
||||| ||||||| ||||||| |||
Sbjct 88924 GTCTTGACAAAGAGCTGCATGGTAG 88948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325566930928490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |